Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G204 Amborella trichopoda HOM05D002440 ORTHO05D002576 8.0e-119 430.6 213 100.0
ATR0661G412 Amborella trichopoda HOM05D002440 ORTHO05D002576 1.1e-14 84.7 143 35.7
TAR629G1939 Trochodendron aralioides HOM05D002440 ORTHO05D002576 6.9e-14 82.0 213 33.3
Nn1g01638 Nelumbo nucifera HOM05D002440 ORTHO05D002576 1.5e-13 80.9 151 38.4
MBI19_g41373_MAGBIO Magnolia biondii HOM05D002440 ORTHO05D002576 8.5e-12 75.1 134 35.1
ATR0661G460 Amborella trichopoda HOM05D002440 ORTHO05D002576 1.4e-11 74.3 150 31.3
MBI06_g12840_MAGBIO Magnolia biondii HOM05D002440 ORTHO05D002576 9.4e-11 71.6 185 32.4
PSO782G0131 Papaver somniferum HOM05D002440 ORTHO05D002576 2.7e-10 70.1 155 31.0
PSO478G1852 Papaver somniferum HOM05D002440 ORTHO05D002576 1.4e-09 67.8 155 30.3
Nn6g33296 Nelumbo nucifera HOM05D002440 ORTHO05D002576 3.9e-09 66.2 127 34.6
MBI04_g31951_MAGBIO Magnolia biondii HOM05D002440 ORTHO05D002576 6.7e-09 65.5 107 36.4
CSS0035560 Camellia sinensis var. sinensis HOM05D002440 ORTHO05D002576 8.8e-09 65.1 97 38.1
CSS0042224 Camellia sinensis var. sinensis HOM05D002440 ORTHO05D002576 8.8e-09 65.1 97 38.1
Os10g0513300 Oryza sativa ssp. japonica HOM05D002440 ORTHO05D002576 8.8e-09 65.1 123 31.7
Potri.008G085600 Populus trichocarpa HOM05D002440 ORTHO05D002576 8.8e-09 65.1 96 35.4
Cfa008722 Carpinus fangiana HOM05D002440 ORTHO05D002576 1.1e-08 64.7 110 35.5
Cfa008723 Carpinus fangiana HOM05D002440 ORTHO05D002576 1.1e-08 64.7 110 35.5
CDE11G0334 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 1.1e-08 64.7 209 30.6
Aqoxy7G00236 Aquilegia oxysepala HOM05D002440 ORTHO05D002576 2.0e-08 63.9 174 31.0
SEGI_04278 Sequoiadendron giganteum HOM05D002440 ORTHO05D002576 2.0e-08 63.9 179 24.0
Sabra08G0063500 Salix brachista HOM05D002440 ORTHO05D002576 3.3e-08 63.2 95 35.8
Nitab4.5_0000200g0200 Nicotiana tabacum HOM05D002440 ORTHO05D002576 4.4e-08 62.8 184 28.8
Nitab4.5_0009853g0010 Nicotiana tabacum HOM05D002440 ORTHO05D002576 5.7e-08 62.4 184 28.8
CANSAT56G3117 Cannabis sativa HOM05D002440 ORTHO05D002576 1.3e-07 61.2 97 37.1
Prupe.1G344800 Prunus persica HOM05D002440 ORTHO05D002576 1.3e-07 61.2 150 33.3
Zm00001eb043640 Zea mays HOM05D002440 ORTHO05D002576 1.3e-07 61.2 107 33.6
Haze_11734 Corylus avellana HOM05D002440 ORTHO05D002576 1.7e-07 60.8 107 36.4
QL04p054979 Quercus lobata HOM05D002440 ORTHO05D002576 1.7e-07 60.8 101 36.6
Sabra02G0147900 Salix brachista HOM05D002440 ORTHO05D002576 1.7e-07 60.8 119 32.8
Sabra02G0148300 Salix brachista HOM05D002440 ORTHO05D002576 1.7e-07 60.8 119 32.8
HPP92_015002 Vanilla planifolia HOM05D002440 ORTHO05D002576 1.7e-07 60.8 143 30.8
Lj7P509T23 Lonicera japonica HOM05D002440 ORTHO05D002576 2.2e-07 60.5 119 33.6
Psat3g108800 Pisum sativum HOM05D002440 ORTHO05D002576 2.2e-07 60.5 166 28.3
Dinv32508 Davidia involucrata HOM05D002440 ORTHO05D002576 2.8e-07 60.1 120 33.3
Dinv43850 Davidia involucrata HOM05D002440 ORTHO05D002576 2.8e-07 60.1 113 34.5
THA.LOC104801398 Tarenaya hassleriana HOM05D002440 ORTHO05D002576 2.8e-07 60.1 116 33.6
TWI74G0980 Tripterygium wilfordii HOM05D002440 ORTHO05D002576 2.8e-07 60.1 108 35.2
TAR622G0810 Trochodendron aralioides HOM05D002440 ORTHO05D002576 2.8e-07 60.1 74 41.9
SEGI_08203 Sequoiadendron giganteum HOM05D002440 ORTHO05D002576 3.7e-07 59.7 97 35.1
CSS0006184 Camellia sinensis var. sinensis HOM05D002440 ORTHO05D002576 4.8e-07 59.3 185 27.6
CiPaw.01G065100 Carya illinoinensis HOM05D002440 ORTHO05D002576 4.8e-07 59.3 97 36.1
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 4.8e-07 59.3 184 27.2
Sp1g00770 Schrenkiella parvula HOM05D002440 ORTHO05D002576 4.8e-07 59.3 100 35.0
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 6.3e-07 58.9 187 32.6
Thhalv10008079m.g Eutrema salsugineum HOM05D002440 ORTHO05D002576 6.3e-07 58.9 132 31.8
Pp3c23_10870 Physcomitrium patens HOM05D002440 ORTHO05D002576 6.3e-07 58.9 124 28.2
Rhsim01G0164900 Rhododendron simsii HOM05D002440 ORTHO05D002576 6.3e-07 58.9 91 34.1
Rhsim09G0072500 Rhododendron simsii HOM05D002440 ORTHO05D002576 6.3e-07 58.9 161 32.9
Sed0005808 Sechium edule HOM05D002440 ORTHO05D002576 6.3e-07 58.9 121 31.4
Actinidia10051 Actinidia chinensis HOM05D002440 ORTHO05D002576 8.2e-07 58.5 185 28.1
AT1G01550 Arabidopsis thaliana HOM05D002440 ORTHO05D002576 8.2e-07 58.5 132 31.8
CAN.G78.112 Capsicum annuum HOM05D002440 ORTHO05D002576 8.2e-07 58.5 103 35.0
Oeu015225.1 Olea europaea HOM05D002440 ORTHO05D002576 8.2e-07 58.5 97 35.1
vmacro20908 Vaccinium macrocarpon HOM05D002440 ORTHO05D002576 8.2e-07 58.5 97 35.1
MSTRG.4845 Avicennia marina HOM05D002440 ORTHO05D002576 1.1e-06 58.2 176 29.5
A04p34270 Brassica napus HOM05D002440 ORTHO05D002576 1.1e-06 58.2 94 38.3
C04p72090 Brassica napus HOM05D002440 ORTHO05D002576 1.1e-06 58.2 94 38.3
BraA04t18888Z Brassica rapa HOM05D002440 ORTHO05D002576 1.1e-06 58.2 94 38.3
Peaxi162Scf00020g00113 Petunia axillaris HOM05D002440 ORTHO05D002576 1.1e-06 58.2 190 27.4
Potri.010G171000 Populus trichocarpa HOM05D002440 ORTHO05D002576 1.1e-06 58.2 96 33.3
PGSC0003DMG400007532 Solanum tuberosum HOM05D002440 ORTHO05D002576 1.1e-06 58.2 120 30.8
Carub.0001s0069 Capsella rubella HOM05D002440 ORTHO05D002576 1.4e-06 57.8 132 31.1
Cc00_g17880 Coffea canephora HOM05D002440 ORTHO05D002576 1.4e-06 57.8 120 34.2
MELO3C006091.2 Cucumis melo HOM05D002440 ORTHO05D002576 1.4e-06 57.8 105 35.2
CsaV3_3G008740 Cucumis sativus L. HOM05D002440 ORTHO05D002576 1.4e-06 57.8 105 36.2
Actinidia20146 Actinidia chinensis HOM05D002440 ORTHO05D002576 1.8e-06 57.4 185 27.6
Phvul.008G059600 Phaseolus vulgaris HOM05D002440 ORTHO05D002576 1.8e-06 57.4 189 27.0
Sc01g0003290 Simmondsia chinensis HOM05D002440 ORTHO05D002576 1.8e-06 57.4 98 32.7
Solyc01g094950.3 Solanum lycopersicum HOM05D002440 ORTHO05D002576 1.8e-06 57.4 184 27.2
THA.LOC104817031 Tarenaya hassleriana HOM05D002440 ORTHO05D002576 1.8e-06 57.4 100 34.0
BcaB03g13592 Brassica carinata HOM05D002440 ORTHO05D002576 2.4e-06 57.0 100 34.0
A10p00440 Brassica napus HOM05D002440 ORTHO05D002576 2.4e-06 57.0 100 34.0
C05p00480 Brassica napus HOM05D002440 ORTHO05D002576 2.4e-06 57.0 100 34.0
BolC5t28837H Brassica oleracea HOM05D002440 ORTHO05D002576 2.4e-06 57.0 100 34.0
BraA10t42324Z Brassica rapa HOM05D002440 ORTHO05D002576 2.4e-06 57.0 100 34.0
CDE09G1211 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 2.4e-06 57.0 146 28.8
Lj3P851T60 Lonicera japonica HOM05D002440 ORTHO05D002576 2.4e-06 57.0 181 30.4
PGSC0003DMG400019412 Solanum tuberosum HOM05D002440 ORTHO05D002576 2.4e-06 57.0 184 27.2
Dinv34887 Davidia involucrata HOM05D002440 ORTHO05D002576 3.1e-06 56.6 101 33.7
Pp3c20_12050 Physcomitrium patens HOM05D002440 ORTHO05D002576 3.1e-06 56.6 124 27.4
RcHm_v2.0_Chr4g0446391 Rosa chinensis HOM05D002440 ORTHO05D002576 3.1e-06 56.6 116 30.2
Sopen01g038730 Solanum pennellii HOM05D002440 ORTHO05D002576 3.1e-06 56.6 184 27.2
PGSC0003DMG402000056 Solanum tuberosum HOM05D002440 ORTHO05D002576 3.1e-06 56.6 184 27.2
unitig_26.g9742 Utricularia gibba HOM05D002440 ORTHO05D002576 3.1e-06 56.6 97 35.1
unitig_749.g14346 Utricularia gibba HOM05D002440 ORTHO05D002576 3.1e-06 56.6 97 35.1
AL1G10850 Arabidopsis lyrata HOM05D002440 ORTHO05D002576 4.1e-06 56.2 132 31.8
ClCG05G001350 Citrullus lanatus HOM05D002440 ORTHO05D002576 4.1e-06 56.2 105 34.3
MD01G1069200 Malus domestica HOM05D002440 ORTHO05D002576 4.1e-06 56.2 102 35.3
Oeu018967.1 Olea europaea HOM05D002440 ORTHO05D002576 4.1e-06 56.2 135 31.1
Oeu054334.1 Olea europaea HOM05D002440 ORTHO05D002576 4.1e-06 56.2 135 31.9
Sopen10g005810 Solanum pennellii HOM05D002440 ORTHO05D002576 4.1e-06 56.2 184 26.1
TWI53G1566 Tripterygium wilfordii HOM05D002440 ORTHO05D002576 4.1e-06 56.2 85 34.1
Lj6P722T61 Lonicera japonica HOM05D002440 ORTHO05D002576 5.3e-06 55.8 210 28.6
Lalb_Chr10g0096721 Lupinus albus HOM05D002440 ORTHO05D002576 5.3e-06 55.8 120 30.0
MD00G1111800 Malus domestica HOM05D002440 ORTHO05D002576 5.3e-06 55.8 102 35.3
MD13G1008300 Malus domestica HOM05D002440 ORTHO05D002576 5.3e-06 55.8 96 34.4
Potri.002G162600 Populus trichocarpa HOM05D002440 ORTHO05D002576 5.3e-06 55.8 119 31.1
Prupe.2G175300 Prunus persica HOM05D002440 ORTHO05D002576 5.3e-06 55.8 102 34.3
Aa31LG1G10730 Aethionema arabicum HOM05D002440 ORTHO05D002576 7.0e-06 55.5 100 31.0
AL4G45310 Arabidopsis lyrata HOM05D002440 ORTHO05D002576 7.0e-06 55.5 91 38.5
Carub.0004s2877 Capsella rubella HOM05D002440 ORTHO05D002576 7.0e-06 55.5 94 39.4
Haze_15547 Corylus avellana HOM05D002440 ORTHO05D002576 7.0e-06 55.5 102 36.3
Manes.01G253600 Manihot esculenta HOM05D002440 ORTHO05D002576 7.0e-06 55.5 146 28.1
Manes.05G031100 Manihot esculenta HOM05D002440 ORTHO05D002576 7.0e-06 55.5 97 34.0
Solyc10g012070.4 Solanum lycopersicum HOM05D002440 ORTHO05D002576 7.0e-06 55.5 103 32.0
Ah.15g095810 Amaranthus hybridus HOM05D002440 ORTHO05D002576 9.1e-06 55.1 109 34.9
AT2G46080 Arabidopsis thaliana HOM05D002440 ORTHO05D002576 9.1e-06 55.1 93 39.8
CARHR141340 Cardamine hirsuta HOM05D002440 ORTHO05D002576 9.1e-06 55.1 96 38.5
Nitab4.5_0012555g0020 Nicotiana tabacum HOM05D002440 ORTHO05D002576 9.1e-06 55.1 184 27.2
Pp3c9_13730 Physcomitrium patens HOM05D002440 ORTHO05D002576 9.1e-06 55.1 125 27.2
Potri.014G088600 Populus trichocarpa HOM05D002440 ORTHO05D002576 9.1e-06 55.1 119 32.8
Sc23g0002660 Simmondsia chinensis HOM05D002440 ORTHO05D002576 9.1e-06 55.1 78 34.6


User provided reference genes

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