Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.3e-181 637.9 323 100.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.0e-78 297.7 279 57.7
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 5.2e-78 295.4 282 57.1
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 1.5e-77 293.9 248 58.5
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.5e-77 293.9 248 58.5
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 1.3e-76 290.8 315 51.7
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.3e-76 290.8 267 56.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.4e-76 288.5 241 61.8
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 6.4e-76 288.5 292 53.4
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.4e-75 287.3 259 57.1
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.8e-75 287.0 241 61.4
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 2.4e-75 286.6 290 54.8
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-75 286.6 290 54.8
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 3.2e-75 286.2 308 53.2
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.2e-75 286.2 241 60.2
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.2e-75 286.2 262 55.7
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 4.1e-75 285.8 261 54.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.1e-75 285.8 219 64.8
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.4e-75 285.4 241 60.2
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 7.0e-75 285.0 267 56.2
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 9.2e-75 284.6 330 50.0
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 1.2e-74 284.3 237 56.5
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.2e-74 284.3 242 57.4
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.2e-74 284.3 304 52.0
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 2.0e-74 283.5 266 56.4
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 4.6e-74 282.3 237 59.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 4.6e-74 282.3 241 59.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 6.0e-74 282.0 259 53.7
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 6.0e-74 282.0 259 53.7
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 6.0e-74 282.0 256 54.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 6.0e-74 282.0 222 62.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.0e-74 282.0 262 54.6
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 7.8e-74 281.6 292 50.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 7.8e-74 281.6 259 53.3
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 7.8e-74 281.6 237 58.2
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 7.8e-74 281.6 318 50.6
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.0e-73 281.2 305 49.5
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.3e-73 280.8 264 54.5
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.3e-73 280.8 262 53.4
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.7e-73 280.4 253 57.7
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 3.0e-73 279.6 239 58.6
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.9e-73 279.3 276 55.4
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.0e-73 278.9 261 54.0
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 6.6e-73 278.5 232 57.8
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 8.6e-73 278.1 248 53.2
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.1e-72 277.7 244 55.3
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.1e-72 277.7 299 51.8
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.5e-72 277.3 292 50.0
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.5e-72 277.3 258 53.9
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.5e-72 276.6 234 60.7
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.3e-72 276.2 228 61.0
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 3.3e-72 276.2 273 51.6
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 3.3e-72 276.2 239 59.8
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 4.3e-72 275.8 264 52.7
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 7.3e-72 275.0 301 50.5
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 7.3e-72 275.0 236 55.5
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 7.3e-72 275.0 237 55.3
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 9.5e-72 274.6 241 55.2
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 9.5e-72 274.6 299 49.5
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.2e-71 274.2 230 60.9
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.6e-71 273.9 309 47.2
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 1.6e-71 273.9 233 58.8
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 2.1e-71 273.5 330 48.8
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 4.7e-71 272.3 244 55.3
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 4.7e-71 272.3 269 55.4
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 8.0e-71 271.6 246 56.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 8.0e-71 271.6 276 51.1
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.8e-70 270.4 284 50.0
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 3.1e-70 269.6 297 48.8
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 3.1e-70 269.6 271 52.0
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 3.1e-70 269.6 310 51.3
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 4.0e-70 269.2 232 58.6
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 4.0e-70 269.2 228 60.5
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 6.8e-70 268.5 242 53.7
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 8.9e-70 268.1 240 57.9
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.2e-69 267.7 327 46.5
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 2.6e-69 266.5 305 49.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.6e-69 266.5 265 54.3
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 3.4e-69 266.2 228 60.1
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.9e-68 262.3 232 55.6
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.9e-68 262.3 240 56.7
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.9e-68 262.3 240 56.7
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.1e-67 261.2 279 52.3
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.1e-67 261.2 315 48.3
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 5.4e-67 258.8 200 61.0
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 5.4e-67 258.8 316 48.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 9.2e-67 258.1 327 46.5
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 9.2e-67 258.1 232 56.0
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 9.2e-67 258.1 232 56.0
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.7e-66 256.5 322 46.9
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 6.0e-66 255.4 255 52.5
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.0e-65 254.6 230 54.3
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 9.5e-64 248.1 313 46.3
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.2e-63 247.7 233 53.2
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 2.2e-60 236.9 294 44.9
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 3.7e-60 236.1 196 58.7
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.4e-59 232.3 284 44.0
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.0e-57 226.5 230 51.3
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.4e-53 213.0 166 63.3
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 3.8e-52 209.5 275 44.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 3.2e-51 206.5 231 47.6
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 4.6e-50 202.6 205 50.7
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 3.3e-48 196.4 242 44.6
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.6e-47 194.1 232 44.0
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.6e-47 194.1 222 50.0
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 8.1e-47 191.8 220 50.5
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.4e-44 181.8 159 55.3
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 9.6e-40 168.3 247 40.9
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 3.6e-39 166.4 145 59.3
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.7e-36 157.5 181 49.2
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.4e-35 154.5 155 52.3
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.9e-35 154.1 146 54.8
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 5.6e-32 142.5 108 63.9
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 5.6e-32 142.5 97 69.1
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.4e-30 137.1 119 54.6
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.4e-30 137.1 143 49.7
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.9e-30 135.6 93 64.5
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 4.2e-27 126.3 100 58.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.2e-26 124.8 151 43.0
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.8e-25 120.9 136 43.4
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 4.0e-22 109.8 107 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 9.0e-22 108.6 200 37.0
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.8e-15 86.3 64 64.1
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 3.8e-12 76.6 76 48.7
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.3e-09 67.4 67 46.3


User provided reference genes

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