Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G146 Amborella trichopoda HOM05D003056 ORTHO05D003422 3.1e-57 226.9 444 100.0
Nn5g30488 Nelumbo nucifera HOM05D003056 ORTHO05D003422 7.2e-30 136.0 91 78.0
GSVIVG01037880001 Vitis vinifera HOM05D003056 ORTHO05D003422 1.8e-25 121.3 243 85.2
VMungo1215G2431 Vigna mungo HOM05D003056 ORTHO05D003422 1.2e-24 118.6 81 77.8
PSO017G1313 Papaver somniferum HOM05D003056 ORTHO05D003422 3.5e-24 117.1 85 72.9
PSO063G7185 Papaver somniferum HOM05D003056 ORTHO05D003422 3.5e-24 117.1 85 72.9
HPP92_020448 Vanilla planifolia HOM05D003056 ORTHO05D003422 1.0e-23 115.5 90 66.7
CDE06G2586 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 2.3e-23 114.4 80 72.5
EL10Ac8g19354 Beta vulgaris HOM05D001121 ORTHO05D003422 5.0e-23 113.2 81 72.8
Cfa004621 Carpinus fangiana HOM05D003056 ORTHO05D003422 5.0e-23 113.2 81 75.3
Potri.001G297300 Populus trichocarpa HOM05D003056 ORTHO05D003422 8.6e-23 112.5 81 74.1
Manes.10G074400 Manihot esculenta HOM05D003056 ORTHO05D003422 1.5e-22 111.7 81 75.3
Sabra16G0186300 Salix brachista HOM05D003056 ORTHO05D003422 1.9e-22 111.3 81 71.6
Ah.14g085500 Amaranthus hybridus HOM05D001121 ORTHO05D001256 7.3e-22 109.4 83 67.5
Lalb_Chr16g0376261 Lupinus albus HOM05D003056 ORTHO05D003422 8.0e-21 105.9 74 74.3
Potri.009G092100 Populus trichocarpa HOM05D003056 ORTHO05D003422 1.0e-20 105.5 78 71.8
AUR62031282 Chenopodium quinoa HOM05D001121 ORTHO05D003422 3.1e-20 104.0 75 70.7
SEGI_12509 Sequoiadendron giganteum HOM05D003056 ORTHO05D003422 8.9e-20 102.4 91 59.3
DCAR_029110 Daucus carota HOM05D003056 ORTHO05D003422 1.5e-19 101.7 79 67.1
CDE04G3342 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 9.8e-19 99.0 84 61.9
Hma1.2p1_3153F.1_g333300 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 3.7e-18 97.1 68 72.1
Lalb_Chr21g0308181 Lupinus albus HOM05D003056 ORTHO05D003422 8.3e-18 95.9 70 71.4
ECA234G1555 Erigeron canadensis HOM05D003056 ORTHO05D003422 4.1e-17 93.6 74 66.2
VMungo0720G1781 Vigna mungo HOM05D003056 ORTHO05D003422 1.2e-16 92.0 81 61.7
Dinv15783 Davidia involucrata HOM05D003056 ORTHO05D003422 2.0e-16 91.3 59 76.3
Glyma.20G131400 Glycine max HOM05D003056 ORTHO05D003422 4.6e-16 90.1 61 75.4
Lj5P217T31 Lonicera japonica HOM05D003056 ORTHO05D003422 3.0e-15 87.4 61 68.9
CANSAT25G1867 Cannabis sativa HOM05D003056 ORTHO05D003422 8.6e-15 85.9 69 68.1
PGR142G1622 Punica granatum HOM05D003056 ORTHO05D003422 1.5e-14 85.1 63 69.8
TPR.G8314 Trifolium pratense HOM05D003056 ORTHO05D003422 7.3e-14 82.8 65 69.2
Zm00001eb326320 Zea mays HOM05D003056 ORTHO05D003422 1.6e-13 81.6 73 58.9
Lj5g0019062 Lotus japonicus HOM05D003056 ORTHO05D003422 2.8e-13 80.9 60 66.7
AUR62027360 Chenopodium quinoa HOM05D000284 ORTHO05D001229 1.4e-12 78.6 56 73.2
arahy.Tifrunner.gnm1.ann1.45X8ED Arachis hypogaea HOM05D003056 ORTHO05D003422 4.0e-12 77.0 58 72.4
arahy.Tifrunner.gnm1.ann1.SCF8I0 Arachis hypogaea HOM05D001373 ORTHO05D003422 4.0e-12 77.0 58 72.4
QL11p032336 Quercus lobata HOM05D003056 ORTHO05D003422 5.8e-11 73.2 54 72.2
Gohir.A03G184400 Gossypium hirsutum HOM05D003056 ORTHO05D003422 9.8e-11 72.4 243 76.5
Phvul.007G042700 Phaseolus vulgaris HOM05D003056 ORTHO05D003422 2.2e-10 71.2 60 65.0
CDE04G2598 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 5.4e-09 66.6 48 70.8
Migut.B00415 Erythranthe guttata HOM05D003056 ORTHO05D003422 1.6e-08 65.1 50 70.0
CSS0049173 Camellia sinensis var. sinensis HOM05D003056 ORTHO05D003422 3.5e-08 63.9 72 45.8
Phvul.002G053300 Phaseolus vulgaris HOM05D003056 ORTHO05D003422 4.6e-08 63.5 47 72.3
CDE07G1890 Ceratophyllum demersum HOM05D001121 ORTHO05D003422 7.8e-08 62.8 54 59.3
Actinidia00395 Actinidia chinensis HOM05D003056 ORTHO05D003422 1.3e-07 62.0 207 81.6
Manes.14G156601 Manihot esculenta HOM05D003056 ORTHO05D003422 1.3e-07 62.0 83 41.0
VMungo0464G0716 Vigna mungo HOM05D003056 ORTHO05D003422 6.6e-07 59.7 70 41.4
Lsat_1_v5_gn_5_80001 Lactuca sativa HOM05D003056 ORTHO05D003422 1.5e-06 58.5 45 71.1
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 1.5e-06 58.5 73 41.1
SGA_v2.0_scaffold66G22432 Striga asiatica HOM05D003056 ORTHO05D003422 1.5e-06 58.5 68 45.6
CARHR210470 Cardamine hirsuta HOM05D003056 ORTHO05D003422 1.9e-06 58.2 51 62.7
Zm00001eb274840 Zea mays HOM05D003056 ORTHO05D003422 2.5e-06 57.8 75 40.0
Haze_10217 Corylus avellana HOM05D001121 ORTHO05D001256 4.3e-06 57.0 35 82.9
Glyma.11G001100 Glycine max HOM05D003056 ORTHO05D003422 7.3e-06 56.2 35 80.0
Potri.006G166200 Populus trichocarpa HOM05D003056 ORTHO05D003422 7.3e-06 56.2 68 41.2
Rhsim12G0158600 Rhododendron simsii HOM05D003056 ORTHO05D003422 7.3e-06 56.2 76 40.8
Sabra06G0127800 Salix brachista HOM05D003056 ORTHO05D003422 7.3e-06 56.2 59 42.4
Eucgr.I01083 Eucalyptus grandis HOM05D003056 ORTHO05D003422 9.5e-06 55.8 37 73.0
Sed0000805 Sechium edule HOM05D003056 ORTHO05D003422 9.5e-06 55.8 35 68.6
Solyc01g107320.3 Solanum lycopersicum HOM05D003056 ORTHO05D003422 9.5e-06 55.8 39 61.5
PGSC0003DMG400025851 Solanum tuberosum HOM05D003056 ORTHO05D003422 9.5e-06 55.8 39 61.5


User provided reference genes

Program Settings