Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 4.7e-247 857.4 445 100.0
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 2.3e-148 529.6 418 63.2
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 2.3e-148 529.6 418 65.1
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 3.9e-148 528.9 417 64.7
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.9e-148 528.9 410 62.9
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 5.0e-148 528.5 415 66.5
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.5e-147 526.9 414 62.3
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.9e-147 526.6 418 64.1
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 2.5e-147 526.2 418 64.1
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 2.1e-146 523.1 420 61.9
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 2.1e-146 523.1 419 64.2
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.8e-146 522.7 405 66.4
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 4.7e-146 521.9 421 63.9
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 8.0e-146 521.2 415 63.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.0e-145 520.8 419 64.4
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.4e-145 520.4 414 65.5
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.8e-145 520.0 414 64.3
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.8e-145 520.0 417 63.5
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.3e-145 519.6 419 64.4
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 3.1e-145 519.2 412 62.9
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.1e-145 519.2 419 64.2
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 8.9e-145 517.7 419 63.7
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 2.6e-144 516.2 418 64.6
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.4e-144 515.8 419 64.0
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 5.8e-144 515.0 419 64.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.3e-143 513.8 415 65.1
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 2.2e-143 513.1 410 60.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 2.9e-143 512.7 422 63.3
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.7e-143 512.3 420 64.3
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 3.7e-143 512.3 415 65.5
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 4.9e-143 511.9 417 62.4
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 6.4e-143 511.5 410 62.2
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 1.1e-142 510.8 414 61.6
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.4e-142 510.4 422 63.7
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 3.2e-142 509.2 414 63.5
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.2e-142 509.2 417 62.4
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 5.4e-142 508.4 419 63.2
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 5.4e-142 508.4 422 61.4
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 7.0e-142 508.1 422 61.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 9.2e-142 507.7 419 62.3
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.7e-141 506.1 416 59.6
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 7.8e-141 504.6 416 63.5
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 7.8e-141 504.6 413 63.0
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.7e-140 503.4 420 61.0
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.0e-140 502.7 416 59.1
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 3.9e-140 502.3 424 59.7
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 8.6e-140 501.1 414 59.2
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.3e-139 498.8 425 58.6
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 9.5e-139 497.7 422 62.6
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 9.5e-139 497.7 415 61.9
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.6e-138 496.9 407 63.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.1e-138 496.5 407 64.1
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.1e-138 496.5 416 59.9
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 6.2e-138 495.0 403 65.0
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.1e-137 494.2 412 62.9
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.4e-137 493.8 421 59.1
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.8e-137 493.4 423 60.3
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.8e-137 493.4 407 63.9
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 4.0e-137 492.3 415 62.2
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 8.9e-137 491.1 408 61.3
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-136 490.7 409 58.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 3.4e-136 489.2 416 60.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 7.5e-136 488.0 409 58.7
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 7.5e-136 488.0 412 60.4
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.3e-135 487.3 435 55.4
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 2.9e-135 486.1 417 60.7
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 6.4e-135 485.0 415 57.1
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 8.3e-135 484.6 409 58.2
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 1.1e-134 484.2 412 62.1
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 4.1e-134 482.3 405 62.2
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 5.4e-134 481.9 410 58.0
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 7.0e-134 481.5 410 57.6
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 1.2e-133 480.7 417 58.5
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.5e-133 479.2 409 57.9
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 6.0e-133 478.4 436 58.9
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.0e-132 477.6 409 57.7
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 1.3e-132 477.2 398 63.1
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 2.3e-132 476.5 409 58.9
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 2.3e-132 476.5 414 56.5
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 8.6e-132 474.6 411 56.9
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.5e-131 473.8 327 70.6
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 3.6e-130 469.2 409 57.5
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 8.1e-130 468.0 409 57.7
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 8.1e-130 468.0 400 61.5
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 8.9e-129 464.5 346 67.3
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 2.2e-127 459.9 423 56.0
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 6.4e-127 458.4 402 60.4
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 3.2e-126 456.1 402 59.5
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 5.4e-126 455.3 419 58.2
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 5.1e-124 448.7 324 70.7
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 6.6e-124 448.4 371 66.0
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.1e-123 447.6 391 58.1
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 9.5e-123 444.5 410 54.1
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.1e-121 441.0 389 61.4
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 6.8e-121 438.3 442 51.8
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.3e-119 434.1 419 53.2
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.5e-117 426.0 414 56.5
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 9.6e-115 417.9 400 58.0
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 7.6e-104 381.7 433 52.4
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.9e-100 369.4 412 48.5
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 4.8e-98 362.5 262 70.2
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.1e-98 361.7 416 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.8e-92 344.0 398 47.5
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 3.0e-84 316.6 317 54.6
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 8.2e-82 308.5 403 45.7
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.6e-80 303.5 295 54.9
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.3e-79 301.2 421 42.8
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.8e-76 290.8 335 45.4
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 3.9e-76 289.7 217 62.2
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.0e-63 246.1 287 45.6
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.2e-54 215.7 203 53.7
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 3.4e-51 206.8 134 67.2
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 1.3e-47 194.9 129 69.0
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 5.4e-41 172.9 222 47.3
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.5e-38 164.9 167 52.7
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 7.0e-33 146.0 145 54.5
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.1e-29 134.4 82 79.3
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 8.0e-29 132.5 99 62.6
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.1e-25 120.2 82 68.3
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.5e-22 110.9 124 49.2
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.5e-22 109.0 124 49.2
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 4.4e-19 100.1 92 65.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 6.6e-15 86.3 51 70.6
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.3e-10 72.0 51 60.8
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 1.1e-09 68.9 101 41.6
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.1e-08 64.7 85 48.2


User provided reference genes

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