Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 1.4e-60 236.1 119 100.0
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.1e-25 120.2 116 60.3
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 4.6e-24 114.8 113 59.3
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 6.7e-23 110.9 99 55.6
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 8.2e-21 104.0 118 51.7
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 8.2e-21 104.0 118 51.7
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 2.6e-19 99.0 113 49.6
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 2.6e-19 99.0 94 54.3
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 3.4e-19 98.6 90 58.9
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 7.7e-19 97.4 113 49.6
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 1.0e-18 97.1 83 61.4
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.3e-18 96.7 72 68.1
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 2.2e-18 95.9 72 68.1
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 5.0e-18 94.7 86 54.7
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 5.0e-18 94.7 113 48.7
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 8.5e-18 94.0 117 47.9
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 8.5e-18 94.0 113 49.6
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.1e-17 93.6 113 47.8
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 1.4e-17 93.2 113 48.7
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 1.9e-17 92.8 74 59.5
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.9e-17 92.8 113 48.7
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 4.2e-17 91.7 113 47.8
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 5.5e-17 91.3 80 60.0
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 7.2e-17 90.9 113 47.8
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 1.2e-16 90.1 93 52.7
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 1.2e-16 90.1 113 46.9
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 2.1e-16 89.4 109 50.5
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.6e-16 88.6 63 68.3
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.6e-16 88.6 63 68.3
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 1.8e-15 86.3 102 49.0
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 1.8e-15 86.3 85 54.1
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 6.7e-15 84.3 94 55.3
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 8.8e-15 84.0 118 41.5
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 8.8e-15 84.0 94 50.0
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 3.3e-14 82.0 78 53.8
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 1.3e-13 80.1 113 48.7
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 2.2e-13 79.3 97 50.5
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 1.1e-12 77.0 113 41.6
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 6.9e-12 74.3 101 45.5
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 6.9e-12 74.3 118 39.8
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.2e-11 73.6 101 45.5
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.5e-11 73.2 101 44.6
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 3.4e-11 72.0 113 44.2
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 4.5e-11 71.6 91 47.3
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 4.5e-11 71.6 78 53.8
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 5.9e-11 71.2 70 51.4
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 1.0e-10 70.5 93 47.3
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 1.7e-10 69.7 55 63.6
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 1.7e-10 69.7 55 63.6
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.7e-10 69.7 57 64.9
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 2.9e-10 68.9 81 48.1
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 2.9e-10 68.9 88 51.1
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 3.8e-10 68.6 73 47.9
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 1.1e-09 67.0 53 62.3
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 1.1e-09 67.0 87 48.3
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 1.4e-09 66.6 91 39.6
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 1.4e-09 66.6 94 45.7
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 2.5e-09 65.9 90 45.6
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 2.5e-09 65.9 87 49.4
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 3.2e-09 65.5 53 62.3
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 3.2e-09 65.5 92 35.9
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 5.5e-09 64.7 83 50.6
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 5.5e-09 64.7 56 62.5
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 7.2e-09 64.3 53 64.2
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 7.2e-09 64.3 84 46.4
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 9.4e-09 63.9 64 53.1
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 9.4e-09 63.9 44 72.7
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 1.2e-08 63.5 58 56.9
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 3.6e-08 62.0 91 45.1
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 3.6e-08 62.0 91 44.0
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 3.6e-08 62.0 63 46.0
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 3.6e-08 62.0 63 46.0
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 4.7e-08 61.6 68 47.1
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.7e-08 61.6 78 46.2
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 7.9e-08 60.8 83 47.0
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 1.0e-07 60.5 69 49.3
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.0e-07 60.5 60 55.0
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 1.4e-07 60.1 86 37.2
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.4e-07 60.1 59 54.2
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.4e-07 60.1 96 32.3
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 1.8e-07 59.7 62 50.0
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 1.8e-07 59.7 79 49.4
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.8e-07 59.7 78 48.7
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 2.3e-07 59.3 84 44.0
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 2.3e-07 59.3 83 44.6
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 3.0e-07 58.9 85 45.9
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 3.0e-07 58.9 85 47.1
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 3.9e-07 58.5 56 53.6
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 3.9e-07 58.5 94 39.4
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 5.1e-07 58.2 78 44.9
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 6.7e-07 57.8 75 46.7
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 1.1e-06 57.0 94 40.4
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 1.5e-06 56.6 53 52.8
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 2.0e-06 56.2 78 41.0
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 2.6e-06 55.8 45 60.0
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 2.6e-06 55.8 68 47.1
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 3.3e-06 55.5 87 39.1
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 3.3e-06 55.5 87 42.5
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 3.3e-06 55.5 87 42.5
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 3.3e-06 55.5 75 42.7
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 4.4e-06 55.1 46 58.7
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 4.4e-06 55.1 60 50.0
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 5.7e-06 54.7 96 31.2
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 9.7e-06 53.9 89 42.7


User provided reference genes

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