Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.2e-71 272.3 149 100.0
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 3.0e-28 129.0 136 52.2
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 6.6e-28 127.9 136 51.5
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 6.6e-28 127.9 144 51.4
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 7.3e-27 124.4 144 49.3
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 7.3e-27 124.4 144 49.3
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 2.8e-26 122.5 144 49.3
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 4.7e-26 121.7 144 49.3
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 6.2e-26 121.3 145 48.3
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 8.1e-26 120.9 140 49.3
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.4e-25 120.2 144 47.9
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 1.8e-25 119.8 130 50.8
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 2.4e-25 119.4 142 48.6
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 2.4e-25 119.4 144 48.6
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 2.4e-25 119.4 139 51.8
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 3.1e-25 119.0 131 51.1
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 3.1e-25 119.0 139 48.2
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 5.2e-25 118.2 129 51.2
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 6.9e-25 117.9 145 46.2
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 9.0e-25 117.5 144 45.1
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 9.0e-25 117.5 144 50.0
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 1.2e-24 117.1 142 51.4
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.5e-24 116.7 144 45.1
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 1.5e-24 116.7 140 50.0
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 2.0e-24 116.3 141 50.4
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 2.6e-24 115.9 140 47.1
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 2.6e-24 115.9 140 49.3
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 2.6e-24 115.9 145 44.1
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 4.4e-24 115.2 130 50.0
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 4.4e-24 115.2 132 50.0
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 4.4e-24 115.2 130 50.8
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 4.4e-24 115.2 130 50.8
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 5.8e-24 114.8 142 48.6
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 5.8e-24 114.8 143 47.6
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 7.6e-24 114.4 140 47.9
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 7.6e-24 114.4 130 50.8
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 9.9e-24 114.0 130 50.8
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 1.3e-23 113.6 123 53.7
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 1.3e-23 113.6 128 50.8
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.7e-23 113.2 130 48.5
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 1.7e-23 113.2 136 47.8
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 2.2e-23 112.8 132 47.0
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 2.2e-23 112.8 127 50.4
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 2.9e-23 112.5 129 50.4
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 2.9e-23 112.5 144 47.2
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 2.9e-23 112.5 130 49.2
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 2.9e-23 112.5 142 45.1
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 3.8e-23 112.1 132 48.5
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 6.4e-23 111.3 145 46.2
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 8.4e-23 110.9 142 45.1
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 8.4e-23 110.9 142 45.1
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.1e-22 110.5 138 47.1
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 1.1e-22 110.5 134 49.3
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.1e-22 110.5 139 46.8
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.4e-22 110.2 144 42.4
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 1.4e-22 110.2 141 45.4
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 1.9e-22 109.8 142 45.8
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 4.2e-22 108.6 145 45.5
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 5.4e-22 108.2 144 46.5
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 5.4e-22 108.2 140 42.1
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.2e-21 107.1 141 46.8
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 1.2e-21 107.1 135 48.9
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 1.2e-21 107.1 128 43.8
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 1.6e-21 106.7 148 44.6
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 1.6e-21 106.7 142 45.8
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.6e-21 106.7 140 46.4
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 2.1e-21 106.3 129 46.5
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 2.1e-21 106.3 144 44.4
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 4.6e-21 105.1 124 46.8
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 4.6e-21 105.1 122 48.4
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 6.0e-21 104.8 146 44.5
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 6.0e-21 104.8 148 45.9
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 6.0e-21 104.8 129 47.3
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 6.0e-21 104.8 145 42.1
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 1.3e-20 103.6 135 46.7
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 2.3e-20 102.8 144 41.0
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 3.9e-20 102.1 137 44.5
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 3.9e-20 102.1 146 43.8
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 5.1e-20 101.7 126 48.4
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 6.6e-20 101.3 146 42.5
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 6.6e-20 101.3 137 43.1
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 8.7e-20 100.9 144 40.3
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 8.7e-20 100.9 132 47.0
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 1.1e-19 100.5 130 44.6
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 1.5e-19 100.1 146 42.5
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 1.9e-19 99.8 131 45.8
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.9e-19 99.8 131 42.7
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 2.5e-19 99.4 113 46.0
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 2.5e-19 99.4 137 43.8
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 2.5e-19 99.4 131 42.7
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 2.5e-19 99.4 136 43.4
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 3.3e-19 99.0 136 41.9
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 3.3e-19 99.0 131 43.5
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 3.3e-19 99.0 146 41.1
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 3.3e-19 99.0 142 40.1
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 3.3e-19 99.0 126 46.8
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.3e-19 98.6 127 42.5
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 7.3e-19 97.8 120 45.0
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 9.6e-19 97.4 126 43.7
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 9.6e-19 97.4 127 41.7
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 1.3e-18 97.1 127 44.1
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 2.8e-18 95.9 136 41.2
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 4.8e-18 95.1 137 40.9
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 6.2e-18 94.7 145 41.4
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 6.2e-18 94.7 123 43.9
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 8.1e-18 94.4 134 42.5
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 8.1e-18 94.4 130 43.1
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 4.0e-17 92.0 127 44.9
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 2.6e-16 89.4 127 40.9
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.5e-16 88.6 116 44.8
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 7.6e-16 87.8 127 39.4
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 1.3e-15 87.0 145 40.7
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 4.9e-15 85.1 127 42.5
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 8.4e-15 84.3 147 37.4
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 9.3e-14 80.9 127 40.2
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 9.3e-14 80.9 127 40.2
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 2.7e-13 79.3 137 36.5
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 3.9e-12 75.5 91 45.1
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 6.2e-10 68.2 95 41.1
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 6.2e-10 68.2 133 36.1
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 1.1e-09 67.4 148 33.8
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.4e-09 67.0 135 32.6
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 1.8e-09 66.6 111 38.7
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.8e-09 66.6 137 34.3
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 2.4e-09 66.2 128 34.4
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 2.0e-08 63.2 93 38.7
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 2.9e-07 59.3 78 39.7
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 7.1e-06 54.7 111 34.2


User provided reference genes

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