Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.5e-96 355.5 187 100.0
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.3e-28 130.6 116 61.2
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 3.2e-27 125.9 183 45.9
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 5.4e-27 125.2 189 48.7
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 5.4e-27 125.2 126 57.9
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.6e-26 123.6 188 45.7
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 3.5e-26 122.5 195 46.7
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 4.6e-26 122.1 189 49.2
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 4.6e-26 122.1 130 55.4
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 6.0e-26 121.7 123 56.1
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 1.3e-25 120.6 185 44.3
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 2.3e-25 119.8 133 55.6
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 2.3e-25 119.8 129 57.4
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 2.3e-25 119.8 190 46.3
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 2.3e-25 119.8 186 45.2
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 2.3e-25 119.8 134 54.5
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.3e-25 119.8 134 54.5
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.3e-25 119.8 134 54.5
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 3.0e-25 119.4 142 52.1
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 3.9e-25 119.0 177 47.5
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.0e-25 118.6 171 45.0
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 1.1e-24 117.5 188 46.3
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.5e-24 117.1 133 51.1
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.9e-24 116.7 134 53.0
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.9e-24 116.7 134 52.2
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 2.5e-24 116.3 149 53.0
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.5e-24 116.3 136 52.9
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.3e-24 115.9 134 53.7
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 3.3e-24 115.9 190 44.2
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 7.3e-24 114.8 187 45.5
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 9.5e-24 114.4 134 51.5
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 9.5e-24 114.4 130 54.6
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-23 114.0 170 47.6
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.2e-23 114.0 170 47.6
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 1.2e-23 114.0 191 44.5
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.6e-23 113.6 143 49.7
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.1e-23 113.2 167 48.5
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 2.1e-23 113.2 166 46.4
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.1e-23 113.2 145 49.7
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 2.8e-23 112.8 189 46.0
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 2.8e-23 112.8 165 46.1
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 2.8e-23 112.8 187 46.5
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 2.8e-23 112.8 125 51.2
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 3.6e-23 112.5 192 45.3
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.7e-23 112.1 137 49.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 4.7e-23 112.1 172 45.9
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 6.2e-23 111.7 184 44.0
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 6.2e-23 111.7 181 46.4
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 8.1e-23 111.3 186 42.5
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.1e-22 110.9 191 45.0
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.1e-22 110.9 186 42.5
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.1e-22 110.9 181 43.6
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.8e-22 110.2 167 44.3
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 2.3e-22 109.8 194 44.3
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 2.3e-22 109.8 150 47.3
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 4.0e-22 109.0 105 61.0
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 4.0e-22 109.0 135 49.6
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 5.2e-22 108.6 181 43.1
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 8.9e-22 107.8 194 44.3
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.2e-21 107.5 181 44.2
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.5e-21 107.1 133 51.1
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.6e-21 106.3 168 44.0
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.6e-21 106.3 192 42.7
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.4e-21 105.9 175 40.6
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.4e-21 105.9 123 56.1
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 5.8e-21 105.1 123 54.5
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 7.5e-21 104.8 181 40.9
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 7.5e-21 104.8 87 67.8
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 7.5e-21 104.8 139 51.8
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.3e-20 104.0 187 43.3
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 1.3e-20 104.0 178 42.7
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.9e-20 102.8 175 39.4
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 4.9e-20 102.1 175 39.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 8.3e-20 101.3 188 39.4
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 8.3e-20 101.3 185 43.2
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 8.3e-20 101.3 188 43.1
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 8.3e-20 101.3 193 40.9
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 1.1e-19 100.9 182 41.2
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 1.1e-19 100.9 188 41.5
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.4e-19 100.5 153 43.1
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-19 99.4 190 41.1
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-19 99.4 190 41.1
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 3.2e-19 99.4 191 41.4
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 7.1e-19 98.2 139 46.0
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 7.1e-19 98.2 139 46.0
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 9.2e-19 97.8 179 43.0
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 1.2e-18 97.4 183 43.2
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.2e-18 97.4 175 44.6
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-18 97.4 92 58.7
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 1.6e-18 97.1 132 48.5
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.1e-18 96.7 184 40.2
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 2.1e-18 96.7 195 39.5
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 3.5e-18 95.9 186 41.9
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 4.6e-18 95.5 83 62.7
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 7.8e-18 94.7 87 59.8
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.0e-17 94.4 184 41.3
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 1.1e-16 90.9 131 45.0
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.1e-15 86.7 79 60.8
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 2.1e-15 86.7 83 55.4
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.8e-15 86.3 196 36.7
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 2.8e-15 86.3 132 47.0
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 3.6e-15 85.9 89 50.6
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 2.3e-14 83.2 137 46.0
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 4.0e-14 82.4 131 44.3
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 6.8e-14 81.6 142 43.7
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 1.2e-13 80.9 128 49.2
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.2e-13 80.9 108 51.9
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.5e-13 80.5 137 43.8
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.5e-13 80.5 137 43.8
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 5.8e-13 78.6 186 38.7
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 9.9e-13 77.8 135 37.8
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 9.9e-13 77.8 88 48.9
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.3e-12 77.4 110 50.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 2.9e-12 76.3 138 45.7
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 4.6e-10 68.9 113 45.1
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 3.0e-09 66.2 119 34.5
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 1.9e-08 63.5 82 45.1


User provided reference genes

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