Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 9.1e-88 328.2 408 100.0
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 3.1e-43 180.3 409 57.7
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 1.5e-42 177.9 401 61.3
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 1.5e-42 177.9 399 62.7
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 2.6e-42 177.2 395 71.4
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 8.4e-41 172.2 401 56.9
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 2.1e-39 167.5 400 63.8
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 6.0e-39 166.0 397 62.5
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 7.9e-39 165.6 396 63.4
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 7.9e-39 165.6 398 65.8
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.3e-38 164.9 397 62.2
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 3.0e-38 163.7 399 53.1
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 3.9e-38 163.3 397 65.7
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 1.1e-37 161.8 117 67.5
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.1e-37 161.8 400 63.5
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 1.1e-37 161.8 396 72.0
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 1.1e-37 161.8 408 61.0
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 1.5e-37 161.4 398 57.8
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 1.5e-37 161.4 397 64.7
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.9e-37 161.0 397 62.5
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 1.9e-37 161.0 397 66.5
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 2.5e-37 160.6 400 64.5
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 2.5e-37 160.6 395 60.0
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 2.5e-37 160.6 398 55.5
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 3.3e-37 160.2 409 58.9
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 3.3e-37 160.2 398 64.1
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 3.3e-37 160.2 398 64.1
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.3e-37 160.2 398 58.8
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 4.3e-37 159.8 397 62.2
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 4.3e-37 159.8 397 62.5
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 4.3e-37 159.8 403 56.6
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 4.3e-37 159.8 403 56.6
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 5.6e-37 159.5 398 55.8
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 7.3e-37 159.1 399 57.4
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 7.3e-37 159.1 397 61.7
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 1.3e-36 158.3 396 55.6
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.3e-36 158.3 109 70.6
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 1.6e-36 157.9 109 67.0
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 2.1e-36 157.5 397 61.7
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 2.8e-36 157.1 397 66.8
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 2.8e-36 157.1 403 59.6
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 3.6e-36 156.8 397 57.7
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 3.6e-36 156.8 397 61.0
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 4.8e-36 156.4 397 57.7
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 4.8e-36 156.4 397 58.9
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 4.8e-36 156.4 397 59.4
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 4.8e-36 156.4 397 57.2
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 6.2e-36 156.0 399 60.7
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 6.2e-36 156.0 397 65.7
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 6.2e-36 156.0 400 55.5
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 8.1e-36 155.6 396 61.1
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 1.1e-35 155.2 397 61.7
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.1e-35 155.2 398 60.6
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 1.1e-35 155.2 398 60.8
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 1.4e-35 154.8 398 58.3
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 1.4e-35 154.8 398 58.3
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 1.4e-35 154.8 398 63.1
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.4e-35 154.8 399 56.4
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 2.4e-35 154.1 398 60.1
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 2.4e-35 154.1 398 60.8
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 4.0e-35 153.3 109 67.0
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 5.3e-35 152.9 398 61.6
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 5.3e-35 152.9 398 61.8
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 5.3e-35 152.9 120 59.2
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 9.0e-35 152.1 109 67.0
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 9.0e-35 152.1 109 67.0
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 9.0e-35 152.1 400 57.8
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 1.2e-34 151.8 398 57.3
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 2.0e-34 151.0 409 53.5
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 2.0e-34 151.0 106 66.0
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 2.6e-34 150.6 107 68.2
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 2.6e-34 150.6 398 56.8
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 3.4e-34 150.2 405 57.3
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 4.5e-34 149.8 430 47.7
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 4.5e-34 149.8 111 63.1
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 5.8e-34 149.4 107 67.3
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 5.8e-34 149.4 106 66.0
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 7.6e-34 149.1 400 53.8
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 9.9e-34 148.7 398 62.1
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 9.9e-34 148.7 398 56.8
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 9.9e-34 148.7 113 62.8
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.3e-33 148.3 106 64.2
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 2.2e-33 147.5 111 64.0
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 2.2e-33 147.5 396 61.4
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 3.8e-33 146.7 400 61.2
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 8.4e-33 145.6 106 65.1
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.4e-32 144.8 106 65.1
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 2.4e-32 144.1 111 60.4
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 7.1e-32 142.5 117 59.8
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 1.2e-31 141.7 100 67.0
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 1.2e-31 141.7 106 63.2
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 2.7e-31 140.6 114 59.6
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 2.7e-31 140.6 114 59.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 3.5e-31 140.2 109 64.2
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 3.5e-31 140.2 107 59.8
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 3.5e-31 140.2 107 61.7
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 4.6e-31 139.8 105 64.8
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 1.3e-30 138.3 106 61.3
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 2.3e-30 137.5 107 59.8
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 6.7e-30 136.0 113 61.1
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.6e-28 131.3 398 58.8
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 4.8e-28 129.8 98 65.3
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 1.1e-27 128.6 109 55.0
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.1e-27 127.1 119 54.6
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 2.2e-25 120.9 92 65.2
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 4.9e-25 119.8 124 52.4
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 3.3e-13 80.5 119 46.2
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 8.2e-12 75.9 118 35.6
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 8.2e-12 75.9 121 40.5
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 7.7e-10 69.3 99 40.4
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 1.4e-08 65.1 61 52.5
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 9.4e-08 62.4 109 44.0
TWI09G0048 Tripterygium wilfordii HOM05D002762 ORTHO05D004643 3.6e-07 60.5 114 36.0
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 3.0e-06 57.4 93 40.9
CBR_g11992 Chara braunii HOM05D002125 ORTHO05D008387 8.8e-06 55.8 96 34.4


User provided reference genes

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