Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 0.0e+00 1147.9 566 100.0
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 2.6e-181 639.4 539 57.0
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.1e-179 634.0 522 57.9
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 6.1e-175 618.2 528 57.0
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 1.3e-172 610.5 519 57.4
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 1.2e-170 604.0 550 55.3
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.9e-170 601.7 458 61.4
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 7.8e-170 601.3 548 54.6
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 2.5e-168 596.3 539 54.2
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 4.3e-168 595.5 485 58.8
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 2.8e-167 592.8 558 53.4
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 4.7e-167 592.0 528 54.0
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.8e-166 590.1 512 56.6
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.2e-165 587.4 535 54.4
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 1.5e-165 587.0 442 61.5
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 2.6e-165 586.3 534 54.3
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 4.4e-165 585.5 489 58.3
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 9.8e-165 584.3 511 56.4
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 8.3e-164 581.3 533 54.0
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.4e-163 580.5 534 54.3
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.4e-163 580.5 459 60.3
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 1.4e-163 580.5 459 60.3
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 3.2e-163 579.3 488 58.6
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 9.2e-163 577.8 459 59.7
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 9.2e-163 577.8 459 59.7
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 1.2e-162 577.4 512 56.1
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 2.0e-162 576.6 488 57.0
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 7.8e-162 574.7 526 55.1
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 1.3e-161 573.9 492 54.9
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.3e-161 573.9 511 55.2
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 2.3e-161 573.2 531 53.9
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 3.9e-161 572.4 512 55.3
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 2.5e-160 569.7 537 52.1
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 5.6e-160 568.5 563 52.6
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 7.3e-160 568.2 526 54.6
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 1.6e-159 567.0 454 59.5
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 1.6e-159 567.0 507 54.4
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 1.6e-159 567.0 527 54.5
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 3.6e-159 565.8 511 54.4
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 4.7e-159 565.5 493 55.4
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 4.7e-159 565.5 493 55.4
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 4.7e-159 565.5 445 59.8
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 6.2e-159 565.1 501 54.1
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 8.1e-159 564.7 514 55.1
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 1.8e-158 563.5 456 57.7
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 8.9e-158 561.2 525 54.1
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 1.2e-157 560.8 455 58.5
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.5e-157 560.5 493 55.0
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 2.6e-157 559.7 535 52.9
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.6e-157 559.7 493 55.2
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 2.6e-157 559.7 465 57.0
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 5.8e-157 558.5 534 53.0
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.1e-155 554.3 520 53.7
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 5.4e-155 552.0 458 57.0
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 9.2e-155 551.2 463 55.1
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 2.7e-154 549.7 452 56.6
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 3.5e-154 549.3 547 51.6
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 4.6e-154 548.9 446 57.2
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 4.6e-154 548.9 520 52.1
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 4.6e-154 548.9 536 50.6
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 4.6e-154 548.9 520 52.3
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.7e-153 547.0 463 56.2
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 6.6e-153 545.0 465 55.3
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 8.6e-153 544.7 458 56.8
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 1.5e-152 543.9 458 56.8
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 1.5e-152 543.9 514 52.7
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 2.5e-152 543.1 519 50.7
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.3e-152 542.7 446 57.4
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 5.6e-152 542.0 518 50.6
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 1.6e-151 540.4 544 51.7
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.1e-150 537.7 454 55.5
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 1.5e-149 533.9 526 49.6
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 1.5e-149 533.9 450 57.1
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 2.0e-149 533.5 464 56.2
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 2.6e-149 533.1 492 52.4
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 8.4e-148 528.1 523 49.9
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 7.1e-147 525.0 521 50.5
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 7.1e-147 525.0 479 53.0
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 6.0e-146 521.9 521 50.1
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 1.0e-145 521.2 521 50.3
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 3.0e-145 519.6 470 54.3
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 2.8e-143 513.1 506 51.0
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.7e-143 512.3 531 49.3
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 8.9e-142 508.1 520 49.8
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 1.3e-140 504.2 385 60.8
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.4e-139 500.7 393 57.8
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.4e-139 500.7 393 57.8
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 5.6e-136 488.8 388 60.1
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 6.2e-135 485.3 458 53.3
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 6.9e-134 481.9 402 57.7
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 9.0e-134 481.5 426 54.5
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 1.7e-132 477.2 388 58.5
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.4e-131 474.2 428 54.2
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 7.1e-131 471.9 386 57.3
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.6e-130 470.7 521 48.0
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 1.7e-129 467.2 456 51.8
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.4e-123 447.6 461 51.0
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.2e-123 446.4 412 55.6
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 5.1e-121 439.1 523 45.7
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.1e-120 438.0 404 55.7
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 6.2e-119 432.2 466 45.9
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 4.5e-117 426.0 488 46.5
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 5.5e-115 419.1 382 52.1
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 3.3e-112 409.8 324 59.3
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.4e-110 404.4 378 54.2
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.0e-109 400.6 361 54.3
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 8.5e-108 395.2 293 61.8
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.0e-101 374.0 462 40.3
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 1.0e-100 371.7 295 60.3
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.7e-100 370.9 362 48.9
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 2.9e-100 370.2 370 50.8
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 9.4e-99 365.2 497 37.8
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 7.4e-96 355.5 352 52.3
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 6.3e-95 352.4 257 62.6
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 3.2e-91 340.1 468 41.9
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.6e-90 337.8 276 57.2
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 2.5e-83 313.9 385 42.6
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 9.4e-83 312.0 303 48.2
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.3e-71 272.7 203 60.1
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.8e-63 247.3 465 33.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.7e-60 238.0 214 53.7
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 3.6e-50 203.8 182 52.2
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 6.4e-47 193.0 195 47.2
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 1.2e-40 172.2 133 56.4
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.7e-31 141.7 125 48.8
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.0e-28 132.5 124 52.4
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.9e-28 130.6 124 51.6
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 6.9e-25 119.8 245 38.4
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 1.9e-22 111.7 95 53.7
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 3.0e-20 104.4 99 56.6
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.9e-19 101.7 71 69.0
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 7.3e-19 99.8 76 69.7
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 6.2e-18 96.7 94 53.2
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 2.1e-13 81.6 121 44.6
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.1e-11 75.9 64 59.4
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 4.5e-08 63.9 78 46.2
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 9.3e-06 56.2 83 42.2


User provided reference genes

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