Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 5.2e-248 860.5 414 100.0
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.9e-105 386.3 380 53.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.9e-105 385.6 380 52.6
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.4e-104 383.3 379 54.6
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.2e-103 380.9 378 53.7
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.6e-103 380.6 380 52.6
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.7e-103 379.8 390 53.1
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 6.0e-103 378.6 379 53.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.0e-102 377.9 377 53.6
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.0e-102 376.3 394 51.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 3.0e-102 376.3 379 51.2
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 5.1e-102 375.6 389 54.0
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 6.6e-102 375.2 277 65.7
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.1e-101 374.4 397 50.4
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 2.5e-101 373.2 382 53.1
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 9.6e-101 371.3 452 46.9
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.1e-100 370.2 378 53.4
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.8e-100 369.8 379 51.7
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.8e-99 367.1 382 51.8
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.4e-99 366.7 332 55.7
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 3.1e-99 366.3 275 66.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 4.0e-99 365.9 378 51.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.5e-98 364.0 254 67.3
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 4.4e-98 362.5 377 52.3
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 5.8e-98 362.1 378 52.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 9.9e-98 361.3 422 48.6
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.9e-98 361.3 385 52.2
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.3e-97 360.9 396 49.5
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.3e-97 360.9 412 51.9
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.8e-97 359.4 247 68.8
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 3.8e-97 359.4 330 55.2
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 8.4e-97 358.2 379 51.5
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 8.4e-97 358.2 348 54.3
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.1e-96 357.8 410 50.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.4e-96 357.5 388 50.8
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.4e-96 357.5 260 66.2
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.9e-96 357.1 372 51.3
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.9e-96 357.1 264 64.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.9e-96 357.1 255 67.1
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 2.4e-96 356.7 284 61.6
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.4e-96 356.7 379 50.4
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 3.2e-96 356.3 286 60.5
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 3.2e-96 356.3 382 51.8
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 4.2e-96 355.9 336 55.4
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.2e-96 355.9 379 51.5
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 5.4e-96 355.5 379 52.0
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 7.1e-96 355.1 388 49.7
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 7.1e-96 355.1 418 47.6
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 9.3e-96 354.8 382 49.2
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 9.3e-96 354.8 346 54.0
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.1e-95 353.6 377 51.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.7e-95 353.2 392 50.0
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 3.5e-95 352.8 370 52.4
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.5e-95 352.8 258 65.5
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.5e-95 352.8 258 65.5
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.5e-95 352.8 264 65.2
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.7e-94 350.5 384 50.5
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.3e-94 350.1 248 65.3
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.3e-94 350.1 370 51.4
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 6.6e-94 348.6 448 44.9
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 8.7e-94 348.2 263 64.6
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.1e-93 347.8 393 48.6
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.9e-93 347.1 251 65.7
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.9e-93 347.1 400 48.8
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.9e-93 347.1 332 53.6
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 2.5e-93 346.7 295 59.0
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.5e-93 346.7 295 59.0
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 5.6e-93 345.5 254 65.0
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 2.8e-92 343.2 369 49.6
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 6.2e-92 342.0 391 49.9
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 2.4e-91 340.1 384 49.2
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 9.0e-91 338.2 380 49.7
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 9.0e-91 338.2 397 50.1
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.2e-90 337.8 385 47.5
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 3.4e-90 336.3 342 53.8
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 4.9e-89 332.4 257 60.7
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.2e-87 327.8 383 47.3
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.4e-83 314.3 256 61.7
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 5.3e-83 312.4 259 59.8
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 6.4e-81 305.4 398 44.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 4.6e-79 299.3 383 46.2
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.8e-76 289.3 400 43.2
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 6.2e-76 288.9 328 47.6
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 5.8e-74 282.3 262 56.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 4.9e-73 279.3 247 55.1
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 7.1e-72 275.4 300 52.3
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 3.7e-68 263.1 430 39.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 2.0e-66 257.3 292 48.6
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 5.0e-65 252.7 178 68.0
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.9e-64 250.8 173 69.4
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 3.6e-63 246.5 183 65.0
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.9e-61 240.7 202 53.0
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 4.5e-58 229.6 298 44.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.5e-57 225.7 157 67.5
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 3.2e-56 223.4 270 45.2
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.5e-56 222.6 289 44.3
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 9.4e-56 221.9 238 50.0
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 3.9e-54 216.5 263 46.8
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 6.9e-51 205.7 374 38.0
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.0e-50 204.1 179 58.1
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.8e-49 199.9 277 42.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.0e-42 177.6 248 41.1
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 6.3e-36 156.0 91 78.0
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.8e-35 154.5 114 66.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 5.5e-32 142.9 281 35.2
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.6e-31 141.4 119 58.0
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 8.8e-30 135.6 426 29.1
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.1e-27 128.6 134 47.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 9.5e-24 115.5 89 61.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.8e-23 114.0 84 60.7
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 2.8e-20 104.0 103 51.5
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.9e-20 103.2 234 34.6
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 8.3e-20 102.4 85 58.8
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 3.8e-17 93.6 147 39.5
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.4e-06 58.5 195 28.7


User provided reference genes

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