Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.8e-102 375.9 187 100.0
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.1e-99 366.7 187 96.8
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 3.1e-99 365.2 187 94.7
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 4.0e-99 364.8 187 95.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 6.9e-99 364.0 187 95.2
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 9.0e-99 363.6 187 96.3
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.5e-98 362.8 187 95.7
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.0e-98 362.5 187 95.7
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 1.0e-97 360.1 187 94.1
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 1.3e-97 359.8 187 92.5
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 94.1
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 92.0
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 92.0
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 94.1
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 92.5
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 92.5
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 3.8e-97 358.2 187 92.5
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.8e-97 358.2 187 92.5
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 3.8e-97 358.2 187 92.5
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 4.9e-97 357.8 187 92.5
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 4.9e-97 357.8 187 92.5
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 6.5e-97 357.5 186 93.0
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 92.0
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 92.5
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 92.0
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.1e-96 356.7 187 91.4
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.1e-96 356.7 187 92.5
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 93.0
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 93.0
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.4e-96 356.3 187 91.4
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 1.4e-96 356.3 186 92.5
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 92.0
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 92.5
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 91.4
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 93.6
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 91.4
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 92.5
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 92.5
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 92.5
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 91.4
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 90.9
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 92.0
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 92.0
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 91.4
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 91.4
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 91.4
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.2e-95 353.2 187 92.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.2e-95 353.2 187 90.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.9
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.9
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.7e-95 352.1 187 90.4
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 4.6e-95 351.3 185 91.9
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 6.0e-95 350.9 187 89.8
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 7.9e-95 350.5 187 89.3
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 7.9e-95 350.5 187 90.4
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.0e-94 350.1 182 93.4
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 91.4
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 90.4
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 89.3
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 1.8e-94 349.4 187 90.9
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.3e-94 349.0 200 86.5
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 88.2
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.8
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 3.9e-94 348.2 182 92.9
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.8
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 88.8
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 6.7e-94 347.4 196 86.7
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 89.3
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 89.8
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 89.8
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 89.8
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 1.5e-93 346.3 187 87.7
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.8
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 89.3
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.8
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 7.4e-93 344.0 187 87.2
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 7.4e-93 344.0 203 84.7
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 9.6e-93 343.6 201 85.1
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 9.6e-93 343.6 187 88.2
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 88.8
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.3e-92 343.2 187 87.2
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 1.3e-92 343.2 185 89.2
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.6e-92 342.8 187 88.2
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.6e-92 342.8 185 88.6
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.7
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 88.8
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 88.2
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 86.6
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.7
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.7
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.7
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 3.7e-92 341.7 187 87.7
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.7e-92 341.7 188 88.8
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 3.7e-92 341.7 188 88.8
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 3.7e-92 341.7 186 88.7
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 86.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 86.1
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 86.6
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 1.1e-91 340.1 182 90.1
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 1.1e-91 340.1 182 90.1
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.1e-91 340.1 187 87.2
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 1.8e-91 339.3 206 82.0
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 87.2
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 3.1e-91 338.6 187 87.2
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 4.1e-91 338.2 187 86.6
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 5.3e-91 337.8 193 86.5
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 9.0e-91 337.0 187 86.1
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.2e-90 336.7 187 84.5
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 3.4e-90 335.1 187 86.6
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 5.8e-90 334.3 181 86.7
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 1.7e-89 332.8 187 85.6
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 2.2e-89 332.4 187 85.6
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 8.4e-89 330.5 206 80.1
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 7.1e-88 327.4 208 78.8
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 1.6e-87 326.2 183 85.8
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.0e-86 323.6 186 83.3
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.8e-86 322.8 173 88.4
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.8e-86 322.8 167 94.0
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 8.7e-86 320.5 206 78.6
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.1e-85 320.1 181 84.0
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 7.4e-85 317.4 241 68.9
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.2e-82 310.1 187 79.1
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-82 309.7 187 78.6
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-82 309.7 187 78.6
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.5e-82 308.1 169 87.6
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.9e-81 305.4 187 77.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 2.7e-79 298.9 187 76.5
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 6.1e-79 297.7 187 80.7
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.8e-78 296.2 172 80.2
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 6.7e-78 294.3 187 78.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 7.4e-77 290.8 158 89.9
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.7e-76 289.7 187 77.5
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 8.2e-76 287.3 149 94.0
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 1.1e-75 287.0 186 78.5
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 1.4e-75 286.6 180 75.0
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.5e-74 283.1 153 88.9
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.0e-74 282.7 187 75.4
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 1.6e-71 273.1 187 75.4
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 3.0e-70 268.9 148 85.8
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 2.6e-69 265.8 214 61.2
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.5e-66 256.5 158 77.8
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.5e-64 249.2 187 70.6
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 2.1e-63 246.1 172 65.7
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.1e-61 240.4 187 65.8
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.2e-57 226.1 124 87.9
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-54 216.9 133 77.4
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 1.4e-51 206.8 103 95.1
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 9.1e-51 204.1 167 56.3
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.9e-48 196.4 98 92.9
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 2.5e-48 196.1 165 55.8
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 5.5e-48 194.9 107 88.8
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 1.0e-46 190.7 139 68.3
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 2.0e-45 186.4 98 86.7
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.6e-45 186.0 103 83.5
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 2.2e-44 183.0 181 56.4
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.0e-38 162.2 85 94.1
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 8.9e-30 134.4 142 55.6
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 7.5e-21 104.8 68 69.1
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.7e-18 96.3 52 90.4
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 2.7e-18 96.3 52 92.3
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 7.3e-16 88.2 49 87.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 8.9e-14 81.3 45 86.7
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.6e-13 79.7 70 64.3
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.4e-13 79.3 41 87.8
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 5.8e-13 78.6 47 78.7
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.2e-12 76.6 41 85.4
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.4e-12 75.1 68 55.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.4e-11 73.2 39 82.1


User provided reference genes

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