Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 2.3e-208 728.8 398 100.0
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 2.2e-25 120.9 175 46.9
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 1.1e-24 118.6 279 41.2
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 4.5e-23 113.2 226 42.0
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.0e-22 112.1 236 39.0
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.3e-22 111.7 169 47.9
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-22 111.7 172 47.1
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-22 111.7 169 47.9
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.7e-22 111.3 169 47.9
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 2.9e-22 110.5 265 37.7
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 3.8e-22 110.2 111 63.1
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.0e-22 109.8 171 47.4
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 8.5e-22 109.0 126 57.9
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.1e-21 108.6 103 64.1
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 1.1e-21 108.6 103 64.1
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 3.2e-21 107.1 187 44.9
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 4.2e-21 106.7 242 36.8
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 4.2e-21 106.7 166 48.8
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 4.2e-21 106.7 294 35.0
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 7.2e-21 105.9 204 41.2
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 7.2e-21 105.9 207 44.0
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 9.4e-21 105.5 209 43.5
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 9.4e-21 105.5 244 36.9
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.2e-20 105.1 109 56.9
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 1.2e-20 105.1 290 36.6
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 1.6e-20 104.8 148 50.7
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.6e-20 104.8 276 38.4
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 2.1e-20 104.4 178 43.3
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.7e-20 104.0 275 39.3
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 2.7e-20 104.0 179 46.9
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 3.6e-20 103.6 211 40.3
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 3.6e-20 103.6 292 34.6
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 3.6e-20 103.6 168 46.4
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.7e-20 103.2 159 47.2
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 4.7e-20 103.2 201 45.3
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 4.7e-20 103.2 267 36.7
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 6.1e-20 102.8 244 38.9
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 8.0e-20 102.4 164 45.7
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.0e-19 102.1 192 43.8
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.0e-19 102.1 192 43.8
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.8e-19 101.3 109 57.8
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.8e-19 101.3 95 63.2
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.3e-19 100.9 229 39.3
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 2.3e-19 100.9 292 36.6
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.3e-19 100.9 203 44.8
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 3.0e-19 100.5 129 54.3
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 3.0e-19 100.5 121 54.5
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 4.0e-19 100.1 94 61.7
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 4.0e-19 100.1 191 45.0
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.0e-19 100.1 173 45.1
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 4.0e-19 100.1 129 51.2
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 4.0e-19 100.1 163 45.4
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 5.2e-19 99.8 202 42.6
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 5.2e-19 99.8 202 42.6
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 5.2e-19 99.8 202 42.6
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 5.2e-19 99.8 222 38.7
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 5.2e-19 99.8 210 41.4
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 5.2e-19 99.8 169 47.3
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 5.2e-19 99.8 163 44.2
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 6.7e-19 99.4 133 49.6
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.7e-19 99.4 133 49.6
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 6.7e-19 99.4 157 47.1
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 1.1e-18 98.6 221 39.8
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.5e-18 98.2 213 39.9
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 2.0e-18 97.8 199 42.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 2.6e-18 97.4 118 53.4
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 2.6e-18 97.4 240 37.9
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 2.6e-18 97.4 194 40.2
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.6e-18 97.4 314 36.0
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.3e-18 97.1 242 41.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 3.3e-18 97.1 169 41.4
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.3e-18 97.1 118 51.7
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.4e-18 96.7 242 40.9
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 4.4e-18 96.7 191 44.0
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 7.5e-18 95.9 96 61.5
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 9.7e-18 95.5 245 38.4
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 9.7e-18 95.5 242 40.5
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 2.8e-17 94.0 123 52.0
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.8e-17 94.0 95 61.1
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 2.8e-17 94.0 209 38.8
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 4.8e-17 93.2 237 36.3
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 6.3e-17 92.8 194 38.1
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 8.2e-17 92.4 246 36.2
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.4e-16 91.7 84 64.3
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-16 91.3 305 37.0
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 3.1e-16 90.5 110 53.6
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 5.3e-16 89.7 199 39.7
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.3e-16 89.7 201 41.8
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 9.1e-16 89.0 155 43.2
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 9.1e-16 89.0 279 33.3
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 9.1e-16 89.0 135 46.7
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 2.7e-15 87.4 100 56.0
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.7e-15 87.4 116 50.9
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.5e-15 87.0 226 37.6
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 3.5e-15 87.0 229 36.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 7.7e-15 85.9 144 44.4
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.0e-14 85.5 175 40.6
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.0e-14 85.5 188 37.8
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.3e-14 85.1 237 37.6
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 1.7e-14 84.7 267 33.7
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.2e-14 84.3 79 62.0
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.9e-14 84.0 105 53.3
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 6.5e-14 82.8 115 48.7
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 6.5e-14 82.8 126 46.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.5e-13 81.6 206 38.3
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 2.5e-13 80.9 228 36.8
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 4.2e-13 80.1 125 47.2
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.2e-12 78.6 75 58.7
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-12 78.2 90 55.6
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 2.7e-12 77.4 114 48.2
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-11 74.7 105 48.6
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 6.8e-11 72.8 226 35.8
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 3.4e-10 70.5 114 46.5
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.4e-10 70.1 61 59.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.0e-08 62.8 73 47.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.2e-07 62.0 73 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1662 Anthoceros agrestis HOM05D015270 ORTHO05D016504 4.5e-07 60.1 251 31.1
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 7.7e-07 59.3 63 54.0
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.9e-06 57.4 58 56.9


User provided reference genes

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