Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G374 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.4e-69 266.2 131 100.0
ATR0464G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.7e-25 119.0 95 60.0
ATR0968G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.8e-22 109.0 95 56.8
ATR0495G021 Amborella trichopoda HOM05D000023 ORTHO05D000014 8.1e-22 107.5 95 57.9
ATR0495G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.0e-20 102.8 95 55.8
ATR0693G388 Amborella trichopoda HOM05D000023 ORTHO05D000014 3.4e-20 102.1 112 45.5
ATR1159G080 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.3e-19 100.1 95 50.5
ATR0991G005 Amborella trichopoda HOM05D000023 ORTHO05D000014 3.2e-18 95.5 106 42.5
ATR0495G004 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.7e-17 92.4 87 54.0
vmacro21302 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.3e-16 89.4 102 43.1
vmacro21301 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.7e-16 87.4 102 42.2
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-15 87.0 102 42.2
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-15 86.3 113 37.2
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.5e-15 85.9 113 37.2
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.5e-15 85.9 104 36.5
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.5e-15 85.9 104 36.5
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.6e-15 84.0 121 32.2
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.6e-15 84.0 98 40.8
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-14 83.2 121 32.2
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 6.3e-14 81.3 102 38.2
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.2e-14 80.9 101 37.6
ATR0448G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.1e-13 80.5 66 62.1
vmacro03238 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.8e-13 79.7 87 47.1
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.1e-13 78.6 101 34.7
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.2e-12 77.0 101 36.6
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-12 77.0 98 39.8
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-12 77.0 98 39.8
PSO591G0023 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-12 77.0 98 39.8
SEGI_29766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.2e-12 77.0 98 40.8
SEGI_32036 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.6e-12 75.9 98 40.8
vmacro15507 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.9e-12 74.7 102 37.3
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.6e-12 74.3 125 29.6
Hma1.2p1_0191F.1_g083200 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.0e-11 73.9 86 41.9
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 1.0e-11 73.9 103 35.0
ATR0495G008 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.3e-11 73.6 68 54.4
PSO063G5350 Papaver somniferum HOM05D000023 ORTHO05D000014 1.3e-11 73.6 98 38.8
Ca_14478_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 1.7e-11 73.2 113 38.1
SEGI_01977 Sequoiadendron giganteum HOM05D002039 ORTHO05D005834 1.7e-11 73.2 101 36.6
SEGI_02209 Sequoiadendron giganteum HOM05D002022 ORTHO05D000014 2.9e-11 72.4 101 35.6
Dinv07359 Davidia involucrata HOM05D000023 ORTHO05D018230 3.8e-11 72.0 116 37.1
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.8e-11 72.0 113 33.6
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.8e-11 72.0 131 36.6
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.4e-11 70.9 87 40.2
Ca_13883_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.9e-10 69.7 113 37.2
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.5e-10 69.3 114 36.8
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.2e-10 68.9 114 36.0
SEGI_17547 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.2e-10 68.9 101 34.7
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 4.2e-10 68.6 108 38.0
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 5.5e-10 68.2 97 37.1
SEGI_37625 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.5e-10 68.2 97 35.1
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.3e-10 67.4 129 32.6
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.6e-09 66.6 107 33.6
Hma1.2p1_1937F.1_g308280 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-09 66.6 118 34.7
SEGI_15194 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 1.6e-09 66.6 78 46.2
SEGI_39341 Sequoiadendron giganteum HOM05D000112 ORTHO05D000014 1.6e-09 66.6 101 33.7
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.1e-09 66.2 129 32.6
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 2.7e-09 65.9 116 35.3
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 3.5e-09 65.5 85 40.0
SEGI_02352 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-09 65.5 103 35.0
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-09 65.5 101 32.7
SEGI_06975 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-09 65.5 101 32.7
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.6e-09 65.1 110 30.9
SEGI_11113 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.6e-09 65.1 108 35.2
SEGI_20337 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 4.6e-09 65.1 66 48.5
AUR62034670 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.1e-09 64.7 104 33.7
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 1.3e-08 63.5 101 31.7
SEGI_36132 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-08 63.5 101 34.7
SEGI_25032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.3e-08 62.8 89 38.2
SEGI_06759 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.0e-08 62.4 83 39.8
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.1e-08 61.6 104 33.7
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 5.1e-08 61.6 107 33.6
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 104 32.7
SEGI_36283 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-08 61.2 89 37.1
SEGI_40819 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-08 61.2 89 37.1
AUR62019609 Chenopodium quinoa HOM05D000023 ORTHO05D000014 8.7e-08 60.8 110 33.6
SEGI_31530 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 8.7e-08 60.8 89 36.0
SEGI_38610 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 8.7e-08 60.8 96 35.4
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.1e-07 60.5 104 32.7
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.1e-07 60.5 110 32.7
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.1e-07 60.5 108 27.8
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-07 60.1 104 32.7
Ca_02571_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 1.5e-07 60.1 76 44.7
SEGI_06105 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 93 36.6
SEGI_11870 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 84 36.9
SEGI_23132 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 110 32.7
SEGI_30239 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-07 59.7 89 36.0
SEGI_40053 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-07 59.7 89 37.1
AUR62011831 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.5e-07 59.3 104 32.7
SEGI_22756 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-07 59.3 108 33.3
ATR0629G050 Amborella trichopoda HOM05D000023 ORTHO05D000014 3.3e-07 58.9 62 48.4
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 96 32.3
SEGI_04939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.3e-07 58.9 98 30.6
SEGI_06292 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-07 58.9 89 34.8
AUR62038522 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.3e-07 58.5 104 30.8
SEGI_06067 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.3e-07 58.5 89 34.8
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.3e-07 58.5 89 34.8
SEGI_06750 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.7e-07 58.2 108 31.5
TWI73G0533 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.7e-07 58.2 92 32.6
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.7e-07 58.2 106 29.2
FvH4_6g40844 Fragaria vesca HOM05D000023 ORTHO05D000014 7.4e-07 57.8 111 28.8
SHI17120 Sapria himalayana HOM05D000023 ORTHO05D000014 7.4e-07 57.8 108 31.5
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 7.4e-07 57.8 106 31.1
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.4e-07 57.8 108 26.9
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 9.7e-07 57.4 109 28.4
PSO357G0123 Papaver somniferum HOM05D000023 ORTHO05D000014 9.7e-07 57.4 93 33.3
SEGI_32897 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.7e-07 57.4 85 35.3
TWI39G1161 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.7e-07 57.4 108 26.9
Atru.chr1.2499 Acer truncatum HOM05D000023 ORTHO05D000014 1.3e-06 57.0 109 29.4
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.3e-06 57.0 75 38.7
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-06 57.0 87 36.8
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-06 57.0 108 31.5
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.3e-06 57.0 108 26.9
Ah.02g120390 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.6e-06 56.6 75 41.3
arahy.Tifrunner.gnm1.ann1.1V5VYE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-06 56.6 107 28.0
arahy.Tifrunner.gnm1.ann1.QM4BK9 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-06 56.6 106 29.2
PSO675G1424 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-06 56.6 86 31.4
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 1.6e-06 56.6 108 31.5
SHI13829 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-06 56.6 108 31.5
SHI20813 Sapria himalayana HOM05D000898 ORTHO05D000762 1.6e-06 56.6 108 31.5
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-06 56.6 108 31.5
SEGI_05659 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.6e-06 56.6 89 34.8
SEGI_28079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.6e-06 56.6 89 34.8
SEGI_36717 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.6e-06 56.6 108 33.3
PSO170G0465 Papaver somniferum HOM05D000023 ORTHO05D000014 2.2e-06 56.2 86 30.2
PSO386G0081 Papaver somniferum HOM05D000023 ORTHO05D000014 2.2e-06 56.2 86 30.2
PSO675G3500 Papaver somniferum HOM05D000023 ORTHO05D000014 2.2e-06 56.2 86 31.4
SEGI_00847 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.2e-06 56.2 89 33.7
SEGI_35317 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.2e-06 56.2 89 32.6
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.8e-06 55.8 105 32.4
AUR62031338 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.8e-06 55.8 106 28.3
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 2.8e-06 55.8 103 29.1
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 2.8e-06 55.8 105 29.5
PSO210G5883 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-06 55.8 86 31.4
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 3.7e-06 55.5 108 31.5
SEGI_12463 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.7e-06 55.5 89 32.6
AUR62034981 Chenopodium quinoa HOM05D000779 ORTHO05D000246 4.8e-06 55.1 110 30.9
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 4.8e-06 55.1 108 30.6
PSO675G6872 Papaver somniferum HOM05D000023 ORTHO05D000014 6.3e-06 54.7 88 29.5
PSO675G6981 Papaver somniferum HOM05D000023 ORTHO05D000014 6.3e-06 54.7 86 31.4
SHI12542 Sapria himalayana HOM05D000023 ORTHO05D000014 6.3e-06 54.7 108 30.6
SEGI_36337 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.3e-06 54.7 89 32.6
CSS0048742 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.2e-06 54.3 92 34.8
PSO210G7591 Papaver somniferum HOM05D000023 ORTHO05D000014 8.2e-06 54.3 60 46.7
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.2e-06 54.3 70 35.7


User provided reference genes

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