Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G367 Amborella trichopoda HOM05D000208 ORTHO05D026547 5.4e-66 254.2 131 100.0
ATR0605G100 Amborella trichopoda HOM05D000208 ORTHO05D000130 1.2e-33 146.7 116 69.0
ATR0605G039 Amborella trichopoda HOM05D000208 ORTHO05D000130 1.9e-31 139.4 115 63.5
CDE10G1301 Ceratophyllum demersum HOM05D000208 ORTHO05D000130 1.7e-11 73.2 69 50.7
ATR0605G170 Amborella trichopoda HOM05D003891 ORTHO05D004802 1.2e-09 67.0 116 40.5
MBI01_g15758_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D000130 2.7e-09 65.9 76 43.4
CANSAT54G0389 Cannabis sativa HOM05D000208 ORTHO05D000130 6.1e-09 64.7 55 60.0
Nn2g15594 Nelumbo nucifera HOM05D000208 ORTHO05D000130 6.1e-09 64.7 117 35.9
Lalb_Chr03g0026191 Lupinus albus HOM05D000208 ORTHO05D000130 1.0e-08 63.9 69 46.4
MBI01_g15759_MAGBIO Magnolia biondii HOM05D000208 ORTHO05D026547 1.8e-08 63.2 102 37.3
Potri.001G015400 Populus trichocarpa HOM05D000208 ORTHO05D000130 2.3e-08 62.8 60 53.3
CSS0033612 Camellia sinensis var. sinensis HOM05D000208 ORTHO05D000130 3.0e-08 62.4 121 38.0
AUR62000074 Chenopodium quinoa HOM05D000208 ORTHO05D000130 3.9e-08 62.0 62 50.0
CiPaw.13G165600 Carya illinoinensis HOM05D000208 ORTHO05D000130 5.1e-08 61.6 59 49.2
Duzib168G1723 Durio zibethinus HOM05D000208 ORTHO05D000130 5.1e-08 61.6 78 51.3
Gohir.A05G067300 Gossypium hirsutum HOM05D000208 ORTHO05D000130 5.1e-08 61.6 92 39.1
Cfa009691 Carpinus fangiana HOM05D000208 ORTHO05D000130 6.7e-08 61.2 52 53.8
TAR699G0001 Trochodendron aralioides HOM05D000208 ORTHO05D000130 6.7e-08 61.2 60 51.7
Cfa009686 Carpinus fangiana HOM05D000208 ORTHO05D000130 8.7e-08 60.8 52 53.8
Gohir.D05G070100 Gossypium hirsutum HOM05D000208 ORTHO05D000130 8.7e-08 60.8 92 39.1
MD11G1023100 Malus domestica HOM05D000208 ORTHO05D000130 8.7e-08 60.8 51 60.8
Sabra01G0010800 Salix brachista HOM05D000208 ORTHO05D000130 8.7e-08 60.8 49 57.1
Thecc.09G223000 Theobroma cacao HOM05D000208 ORTHO05D000130 8.7e-08 60.8 47 63.8
TWI60G1382 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 8.7e-08 60.8 52 53.8
Gorai.009G071200 Gossypium raimondii HOM05D000208 ORTHO05D000130 1.1e-07 60.5 94 41.5
QL01p006320 Quercus lobata HOM05D000208 ORTHO05D000130 1.1e-07 60.5 52 53.8
TAR636G0911 Trochodendron aralioides HOM05D000208 ORTHO05D000130 1.1e-07 60.5 52 55.8
MSTRG.18405 Avicennia marina HOM05D000208 ORTHO05D000130 1.5e-07 60.1 62 50.0
Ciclev10014199m.g Citrus clementina HOM05D000208 ORTHO05D000130 1.5e-07 60.1 52 59.6
COL.COLO4_37763 Corchorus olitorius HOM05D000208 ORTHO05D000130 1.5e-07 60.1 81 42.0
Lj2C659G1 Lonicera japonica HOM05D000208 ORTHO05D000130 1.5e-07 60.1 77 42.9
QL01p006349 Quercus lobata HOM05D000208 ORTHO05D000130 1.5e-07 60.1 52 53.8
TAR636G1757 Trochodendron aralioides HOM05D000208 ORTHO05D000130 1.9e-07 59.7 52 57.7
TAR636G2143 Trochodendron aralioides HOM05D000208 ORTHO05D000130 1.9e-07 59.7 52 55.8
Lj3g0003529 Lotus japonicus HOM05D000208 ORTHO05D000130 2.5e-07 59.3 61 49.2
Cfa009692 Carpinus fangiana HOM05D000208 ORTHO05D000130 4.3e-07 58.5 52 53.8
TWI34G1977 Tripterygium wilfordii HOM05D000208 ORTHO05D000130 4.3e-07 58.5 56 53.6
Cc01_g04060 Coffea canephora HOM05D000208 ORTHO05D000130 5.7e-07 58.2 52 55.8
Duzib168G1149 Durio zibethinus HOM05D000208 ORTHO05D000130 5.7e-07 58.2 51 56.9
Glyma.11G130200 Glycine max HOM05D000208 ORTHO05D000130 5.7e-07 58.2 61 52.5
COL.COLO4_22622 Corchorus olitorius HOM05D000208 ORTHO05D000130 7.4e-07 57.8 47 57.4
Potri.009G022400 Populus trichocarpa HOM05D000208 ORTHO05D000130 7.4e-07 57.8 123 36.6
QL01p006384 Quercus lobata HOM05D000208 ORTHO05D000130 7.4e-07 57.8 58 50.0
Thecc.09G222800 Theobroma cacao HOM05D000208 ORTHO05D000130 7.4e-07 57.8 51 52.9
Haze_23043 Corylus avellana HOM05D000208 ORTHO05D000130 9.7e-07 57.4 52 53.8
Eucgr.J00824 Eucalyptus grandis HOM05D000208 ORTHO05D000130 9.7e-07 57.4 71 38.0
Eucgr.L01891 Eucalyptus grandis HOM05D000208 ORTHO05D000130 9.7e-07 57.4 71 38.0
Glyma.11G130300 Glycine max HOM05D000208 ORTHO05D000130 9.7e-07 57.4 52 50.0
Hma1.2p1_0811F.1_g222200 Hydrangea macrophylla HOM05D000208 ORTHO05D000130 9.7e-07 57.4 61 45.9
MD03G1021200 Malus domestica HOM05D000208 ORTHO05D000130 9.7e-07 57.4 50 58.0
Psat7g213600 Pisum sativum HOM05D000208 ORTHO05D000130 9.7e-07 57.4 51 52.9
GSVIVG01025339001 Vitis vinifera HOM05D000208 ORTHO05D000130 9.7e-07 57.4 52 55.8
Haze_24433 Corylus avellana HOM05D000208 ORTHO05D000130 1.3e-06 57.0 51 52.9
Migut.D00556 Erythranthe guttata HOM05D000208 ORTHO05D000130 1.3e-06 57.0 47 57.4
Eucgr.J00820 Eucalyptus grandis HOM05D000208 ORTHO05D000130 1.3e-06 57.0 62 43.5
EL10Ac4g10321 Beta vulgaris HOM05D000208 ORTHO05D000130 1.6e-06 56.6 66 42.4
Cfa009687 Carpinus fangiana HOM05D000208 ORTHO05D000130 1.6e-06 56.6 52 51.9
Glyma.12G054700 Glycine max HOM05D000208 ORTHO05D000130 1.6e-06 56.6 51 52.9
vmacro04168 Vaccinium macrocarpon HOM05D000208 ORTHO05D000130 1.6e-06 56.6 50 56.0
AUR62019247 Chenopodium quinoa HOM05D000208 ORTHO05D000130 2.2e-06 56.2 59 47.5
CSS0032783 Camellia sinensis var. sinensis HOM05D000208 ORTHO05D000130 2.8e-06 55.8 47 55.3
Medtr4g066170 Medicago truncatula HOM05D000208 ORTHO05D000130 4.8e-06 55.1 48 54.2
Atru.chr3.2495 Acer truncatum HOM05D000208 ORTHO05D000130 6.3e-06 54.7 51 47.1
AUR62019248 Chenopodium quinoa HOM05D000208 ORTHO05D000130 6.3e-06 54.7 59 47.5
Migut.D00557 Erythranthe guttata HOM05D000208 ORTHO05D000130 6.3e-06 54.7 47 55.3
RcHm_v2.0_Chr5g0078061 Rosa chinensis HOM05D000208 ORTHO05D000130 8.2e-06 54.3 59 45.8
TAR699G0002 Trochodendron aralioides HOM05D000208 ORTHO05D000130 8.2e-06 54.3 59 50.8


User provided reference genes

Program Settings