Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 4.5e-211 737.6 369 100.0
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 4.3e-137 491.9 356 67.1
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 7.4e-137 491.1 357 66.9
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 2.4e-135 486.1 356 66.0
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 3.8e-133 478.8 357 63.6
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 3.8e-133 478.8 356 65.4
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 9.3e-132 474.2 356 65.2
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 1.2e-131 473.8 357 65.0
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 3.5e-131 472.2 357 65.5
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 7.9e-131 471.1 356 64.9
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 1.0e-130 470.7 357 65.3
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.3e-130 469.5 357 65.0
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 3.9e-130 468.8 354 64.4
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 2.5e-129 466.1 353 62.9
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 3.3e-129 465.7 360 63.1
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.4e-129 464.5 356 64.6
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 7.4e-129 464.5 356 64.6
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.2e-128 463.0 360 63.1
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 2.8e-128 462.6 357 63.9
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 4.8e-128 461.8 356 63.2
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 4.8e-128 461.8 358 65.1
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 4.8e-128 461.8 357 63.3
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 2.4e-127 459.5 358 63.7
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 3.1e-127 459.1 356 63.8
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 6.9e-127 458.0 357 62.2
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 6.9e-127 458.0 356 63.5
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 1.5e-126 456.8 356 64.0
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 1.5e-126 456.8 356 63.5
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 2.6e-126 456.1 354 63.0
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 4.5e-126 455.3 357 61.1
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 5.9e-126 454.9 356 63.5
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 1.7e-125 453.4 359 62.1
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 2.2e-125 453.0 356 62.4
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 2.2e-125 453.0 357 60.5
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 2.9e-125 452.6 356 62.6
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 3.8e-125 452.2 356 63.5
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 5.0e-125 451.8 356 63.2
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 5.0e-125 451.8 357 62.7
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 6.5e-125 451.4 356 63.2
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 6.5e-125 451.4 352 62.5
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 1.1e-124 450.7 356 63.5
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 1.1e-124 450.7 356 63.2
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 1.9e-124 449.9 356 62.9
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 7.2e-124 448.0 356 62.9
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 1.2e-123 447.2 357 63.9
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 2.1e-123 446.4 356 61.8
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 2.1e-123 446.4 370 60.3
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 6.1e-123 444.9 354 61.9
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 7.9e-123 444.5 358 62.0
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 3.0e-122 442.6 356 62.9
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 5.1e-122 441.8 394 58.1
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 6.7e-122 441.4 360 60.6
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.1e-121 440.7 357 61.6
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 1.5e-121 440.3 356 61.8
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 1.5e-121 440.3 359 60.4
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 1.5e-121 440.3 360 61.7
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 2.5e-121 439.5 356 62.6
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 2.5e-121 439.5 360 60.6
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 3.3e-121 439.1 369 60.2
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 4.3e-121 438.7 355 63.1
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 9.7e-121 437.6 356 62.1
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 1.3e-120 437.2 356 62.1
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 2.2e-120 436.4 356 62.1
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 2.8e-120 436.0 356 61.8
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 8.2e-120 434.5 356 61.5
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.4e-119 433.7 359 61.6
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 1.4e-119 433.7 356 59.6
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 2.6e-118 429.5 387 55.6
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 7.7e-118 427.9 357 59.4
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 5.0e-117 425.2 360 58.9
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 1.4e-116 423.7 358 58.4
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 1.4e-116 423.7 313 65.8
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 5.5e-116 421.8 360 58.1
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 1.4e-114 417.2 358 58.1
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 8.8e-114 414.5 354 58.5
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 1.4e-111 407.1 357 59.1
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 9.1e-111 404.4 355 58.6
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.2e-110 404.1 351 57.3
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.4e-108 397.1 351 56.7
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 2.7e-107 392.9 360 56.7
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 4.7e-107 392.1 354 57.6
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.8e-106 390.2 359 57.1
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 2.6e-105 386.3 352 56.8
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 1.3e-104 384.0 372 55.9
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 2.8e-104 382.9 376 55.3
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.2e-102 377.5 350 54.0
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 2.6e-102 376.3 357 52.7
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 5.0e-101 372.1 473 44.2
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 1.5e-100 370.5 364 50.3
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 6.8e-98 361.7 355 51.5
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 8.3e-96 354.8 356 52.0
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.8e-95 353.6 252 65.5
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 2.7e-94 349.7 355 49.6
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 4.5e-94 349.0 377 49.1
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 6.8e-90 335.1 257 62.3
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 5.7e-89 332.0 360 51.7
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 1.1e-87 327.8 258 60.5
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 5.4e-87 325.5 345 48.4
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 2.7e-86 323.2 357 48.7
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.2e-83 314.3 355 45.9
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 2.1e-83 313.5 251 61.8
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 5.4e-79 298.9 357 43.1
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 5.9e-78 295.4 202 68.8
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 9.5e-76 288.1 352 44.9
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 6.1e-75 285.4 356 43.8
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 2.6e-73 280.0 298 50.0
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 7.8e-70 268.5 360 43.9
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 1.7e-64 250.8 201 62.2
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 4.9e-48 196.1 148 66.2
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 1.7e-40 171.0 402 32.3
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 6.4e-40 169.1 145 60.7
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 2.3e-37 160.6 182 53.3
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 1.9e-31 141.0 99 67.7
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.8e-27 127.1 352 26.7
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.4e-26 124.8 98 60.2
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 7.6e-25 119.0 98 57.1
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 2.2e-24 117.5 129 51.9
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 2.7e-22 110.5 91 60.4
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 3.9e-21 106.7 128 46.9
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 3.9e-21 106.7 92 59.8
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 9.6e-20 102.1 134 43.3
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 2.8e-19 100.5 84 54.8
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 1.0e-16 92.0 95 51.6
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 9.3e-15 85.5 84 54.8
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 1.2e-14 85.1 99 47.5
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 1.2e-14 85.1 99 47.5
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 4.6e-14 83.2 82 54.9
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 1.0e-13 82.0 49 75.5
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 1.5e-12 78.2 130 38.5
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 8.2e-11 72.4 86 48.8
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 1.2e-06 58.5 68 50.0
Mapoly0041s0070 Marchantia polymorpha HOM05D057041 ORTHO05D018939 4.6e-06 56.6 224 24.6


User provided reference genes

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