Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G264 Amborella trichopoda HOM05D000141 ORTHO05D004489 0.0e+00 1318.5 664 100.0
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 2.2e-304 1048.5 638 81.2
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 1.5e-302 1042.3 643 80.4
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 2.5e-300 1035.0 639 80.4
SEGI_37552 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 2.3e-298 1028.5 639 78.6
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 2.3e-298 1028.5 639 79.5
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 8.8e-298 1026.5 634 80.4
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 1.1e-295 1019.6 615 81.1
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 2.4e-295 1018.5 640 78.9
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 3.1e-295 1018.1 640 78.6
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 2.0e-294 1015.4 634 79.0
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 2.6e-294 1015.0 650 77.2
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 4.5e-294 1014.2 613 80.9
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 5.9e-294 1013.8 647 77.9
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 1.7e-293 1012.3 640 78.3
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 8.5e-293 1010.0 640 78.6
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 1.9e-292 1008.8 640 78.8
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 2.5e-292 1008.4 638 78.2
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 4.2e-292 1007.7 639 78.1
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 5.5e-292 1007.3 641 77.4
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 7.2e-292 1006.9 634 79.0
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 7.2e-292 1006.9 640 77.7
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 7.2e-292 1006.9 639 77.6
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.2e-291 1006.1 640 77.7
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.6e-291 1005.7 640 77.7
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 4.7e-291 1004.2 640 77.5
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 4.7e-291 1004.2 640 78.0
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 6.1e-291 1003.8 641 77.7
CDE11G0155 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 1.0e-290 1003.0 639 77.9
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 1.1e-289 999.6 641 77.1
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 1.1e-289 999.6 628 78.2
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 2.6e-289 998.4 639 77.6
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 5.7e-289 997.3 644 77.3
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 9.7e-289 996.5 640 77.3
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 9.7e-289 996.5 592 82.6
Sopen02g017470 Solanum pennellii HOM05D000141 ORTHO05D004489 1.3e-288 996.1 639 76.2
PGSC0003DMG400009428 Solanum tuberosum HOM05D000141 ORTHO05D004489 1.3e-288 996.1 639 76.1
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 1.7e-288 995.7 640 77.3
Lj4C246T10 Lonicera japonica HOM05D000141 ORTHO05D004489 2.2e-288 995.3 638 77.4
Solyc02g068340.3 Solanum lycopersicum HOM05D000141 ORTHO05D004489 2.2e-288 995.3 639 76.2
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 6.3e-288 993.8 629 78.9
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 6.3e-288 993.8 640 77.3
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 8.2e-288 993.4 627 78.6
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 8.2e-288 993.4 629 78.9
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 1.1e-287 993.0 640 77.2
Oeu004295.1 Olea europaea HOM05D000141 ORTHO05D004489 1.8e-287 992.3 629 77.3
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 7.0e-287 990.3 642 76.0
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 1.2e-286 989.6 640 75.8
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 2.0e-286 988.8 641 76.8
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 2.0e-286 988.8 638 76.3
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 2.6e-286 988.4 643 76.4
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 5.9e-286 987.3 629 77.9
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 7.7e-286 986.9 639 75.9
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 1.3e-285 986.1 639 76.7
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 3.8e-285 984.6 642 76.0
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 5.0e-285 984.2 639 75.6
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 1.9e-284 982.2 637 75.8
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 3.2e-284 981.5 632 76.9
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 3.2e-284 981.5 621 77.9
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 8.0e-283 976.9 627 78.1
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 1.0e-282 976.5 639 75.1
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 4.0e-282 974.5 641 75.8
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 4.0e-282 974.5 643 76.0
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 4.0e-282 974.5 620 77.1
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 6.8e-282 973.8 639 76.4
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 6.8e-282 973.8 644 75.3
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 6.8e-282 973.8 581 81.1
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 8.8e-282 973.4 641 74.3
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 1.2e-281 973.0 631 76.2
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.5e-281 972.6 641 75.7
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 2.0e-281 972.2 642 75.7
ECA238G3829 Erigeron canadensis HOM05D000141 ORTHO05D004489 7.5e-281 970.3 641 76.1
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 7.5e-281 970.3 639 74.8
SGA_v2.0_scaffold45G17090 Striga asiatica HOM05D000141 ORTHO05D004489 6.3e-280 967.2 631 75.6
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 2.7e-278 961.8 620 76.9
Medtr8g072430 Medicago truncatula HOM05D000141 ORTHO05D004489 2.7e-278 961.8 635 75.3
EL10Ac6g14723 Beta vulgaris HOM05D000141 ORTHO05D004489 1.3e-277 959.5 646 74.6
Zm00001eb067080 Zea mays HOM05D000141 ORTHO05D004489 2.9e-277 958.4 602 79.1
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 5.5e-276 954.1 642 74.6
Ah.03g149230 Amaranthus hybridus HOM05D000141 ORTHO05D004489 6.1e-275 950.7 642 74.3
SGA_v2.0_scaffold229G43289 Striga asiatica HOM05D000141 ORTHO05D004489 1.4e-274 949.5 661 72.8
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 2.3e-274 948.7 618 76.1
AUR62016257 Chenopodium quinoa HOM05D000141 ORTHO05D004489 3.0e-274 948.3 644 74.4
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 1.2e-273 946.4 641 72.2
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 1.2e-273 946.4 642 73.8
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 9.8e-273 943.3 730 66.6
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 3.7e-272 941.4 640 72.3
AUR62003324 Chenopodium quinoa HOM05D000141 ORTHO05D004489 1.6e-270 936.0 676 71.2
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 1.7e-269 932.6 585 77.8
AT5G65930 Arabidopsis thaliana HOM05D000141 ORTHO05D004489 1.2e-267 926.4 637 72.7
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 3.6e-267 924.9 636 73.0
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 4.7e-267 924.5 637 72.5
Thhalv10003527m.g Eutrema salsugineum HOM05D000141 ORTHO05D004489 6.1e-267 924.1 638 72.7
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 1.0e-266 923.3 640 72.3
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 1.4e-266 922.9 637 72.4
Sabra11G0131600 Salix brachista HOM05D000141 ORTHO05D004489 1.4e-266 922.9 641 72.9
Sp2g30770 Schrenkiella parvula HOM05D000141 ORTHO05D004489 1.4e-266 922.9 638 72.6
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 8.9e-266 920.2 643 72.8
Os04g0666900 Oryza sativa ssp. japonica HOM05D000141 ORTHO05D004489 1.2e-265 919.8 564 80.0
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 1.8e-263 912.5 558 80.3
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 4.1e-263 911.4 641 71.5
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 4.1e-263 911.4 641 71.5
AagrBONN_evm.TU.Sc2ySwM_228.4247 Anthoceros agrestis HOM05D000141 ORTHO05D004489 1.2e-262 909.8 664 68.5
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 7.8e-262 907.1 638 71.5
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 7.8e-262 907.1 638 71.5
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 1.0e-261 906.7 630 72.9
Mapoly0012s0174 Marchantia polymorpha HOM05D000141 ORTHO05D004489 5.6e-260 901.0 670 67.3
BcaB04g20133 Brassica carinata HOM05D000141 ORTHO05D004489 4.0e-258 894.8 639 70.6
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 4.9e-256 887.9 663 68.9
A09p10250 Brassica napus HOM05D000141 ORTHO05D004489 7.0e-255 884.0 639 70.9
BraA09t36670Z Brassica rapa HOM05D000141 ORTHO05D004489 1.2e-254 883.2 638 71.2
BolC9t54106H Brassica oleracea HOM05D000141 ORTHO05D004489 3.5e-254 881.7 613 72.8
C09p12180 Brassica napus HOM05D000141 ORTHO05D004489 3.9e-253 878.2 613 72.4
BcaC04g23100 Brassica carinata HOM05D000141 ORTHO05D004489 2.5e-252 875.5 613 72.3
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 1.1e-250 870.2 620 71.5
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 6.8e-250 867.5 640 66.6
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 2.0e-249 865.9 640 66.4
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 1.9e-247 859.4 617 71.5
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 4.3e-244 848.2 622 66.6
BraA02t09381Z Brassica rapa HOM05D000141 ORTHO05D004489 3.7e-240 835.1 664 66.4
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 8.3e-240 833.9 622 66.4
Pp3c11_5890 Physcomitrium patens HOM05D000141 ORTHO05D004489 1.3e-224 783.5 631 63.2
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 3.0e-221 772.3 590 66.9
Rhsim08G0024500 Rhododendron simsii HOM05D000141 ORTHO05D004489 7.3e-220 767.7 586 64.5
Pp3c2_29920 Physcomitrium patens HOM05D000141 ORTHO05D004489 6.9e-218 761.1 585 65.0
CBR_g9092 Chara braunii HOM05D000141 ORTHO05D004489 1.2e-214 750.4 647 59.7
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.3e-213 746.9 635 61.6
CBR_g8104 Chara braunii HOM05D000141 ORTHO05D004489 4.1e-202 708.8 546 64.8
HPP92_023789 Vanilla planifolia HOM05D000141 ORTHO05D004489 2.8e-195 686.0 581 57.1
vmacro18483 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 8.5e-192 674.5 520 63.3
unitig_748.g7256 Utricularia gibba HOM05D000141 ORTHO05D004489 3.7e-187 659.1 527 64.5
Nitab4.5_0000973g0040 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.1e-183 647.5 386 80.8
CsaV3_3G000070 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.4e-178 629.8 419 75.2
Cre06.g278125 Chlamydomonas reinhardtii HOM05D000141 ORTHO05D004489 6.7e-173 611.7 579 55.3
Dinv28284 Davidia involucrata HOM05D000141 ORTHO05D004489 7.5e-164 581.6 467 66.4
HPP92_022037 Vanilla planifolia HOM05D000141 ORTHO05D004489 4.1e-162 575.9 437 66.4
Nitab4.5_0011544g0030 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.0e-157 561.2 341 79.2
PRCOL_00006273 Prasinoderma coloniale HOM05D000141 ORTHO05D004489 7.0e-138 495.4 595 45.0
TPR.G33741 Trifolium pratense HOM05D000141 ORTHO05D004489 3.5e-129 466.5 343 69.4
MCO02G386 Micromonas commoda HOM05D000141 ORTHO05D004489 3.6e-126 456.4 566 45.2
Nitab4.5_0017516g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 1.8e-117 427.6 294 72.4
Nitab4.5_0028853g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004489 6.8e-117 425.6 294 72.1
TPR.G33746 Trifolium pratense HOM05D000141 ORTHO05D004489 3.2e-106 390.2 245 75.5
Zm00001eb433100 Zea mays HOM05D000141 ORTHO05D004489 1.1e-98 365.2 226 78.3
AUR62029523 Chenopodium quinoa HOM05D000141 ORTHO05D004489 3.4e-84 317.0 249 64.7
CsaV3_3G000080 Cucumis sativus L. HOM05D000141 ORTHO05D004489 3.0e-80 303.9 198 76.3
SEGI_05573 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 4.1e-77 293.5 164 86.0
TAR374G1151 Trochodendron aralioides HOM05D000141 ORTHO05D004489 9.1e-77 292.4 219 66.7
HPP92_022027 Vanilla planifolia HOM05D000141 ORTHO05D004489 6.3e-70 269.6 164 83.5
Sed0022500 Sechium edule HOM05D000141 ORTHO05D004489 1.2e-65 255.4 330 45.5
Hund19673 Selenicereus undatus HOM05D000141 ORTHO05D004489 7.9e-65 252.7 200 66.0
Hund19674 Selenicereus undatus HOM05D000141 ORTHO05D004489 7.9e-65 252.7 165 76.4
SHI32499 Sapria himalayana HOM05D000141 ORTHO05D004489 1.4e-56 225.3 168 65.5
SHI32497 Sapria himalayana HOM05D000141 ORTHO05D016149 6.7e-56 223.0 179 59.2
CDE02G4290 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 7.5e-47 193.0 172 58.1
Psat6g138520 Pisum sativum HOM05D000141 ORTHO05D004489 1.3e-43 182.2 199 51.8
Hma1.2p1_0490F.1_g164200 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 2.6e-39 167.9 203 47.8
CDE02G4588 Ceratophyllum demersum HOM05D000141 ORTHO05D004489 5.4e-37 160.2 154 54.5
SHI32496 Sapria himalayana HOM05D000141 ORTHO05D004489 4.0e-32 144.1 113 58.4
Psat2g033360 Pisum sativum HOM05D000141 ORTHO05D004489 8.9e-32 142.9 122 62.3
SEGI_08917 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 5.9e-28 130.2 115 56.5
CSS0031452 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 1.3e-27 129.0 73 82.2
MBI05_g40559_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 1.7e-27 128.6 141 52.5
CSS0000553 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 92 69.6
CSS0012389 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 73 80.8
CSS0025758 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 73 80.8
CSS0025980 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 92 69.6
CSS0033966 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 73 80.8
CSS0040247 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 5.0e-27 127.1 73 80.8
CSS0032073 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 1.1e-26 125.9 73 80.8
CSS0026006 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D016149 1.5e-26 125.6 73 79.5
SEGI_06404 Sequoiadendron giganteum HOM05D000141 ORTHO05D004489 1.9e-26 125.2 103 60.2
Actinidia17134 Actinidia chinensis HOM05D000141 ORTHO05D004489 7.3e-26 123.2 79 75.9
Mapoly0090s0045 Marchantia polymorpha HOM05D000141 ORTHO05D024949 1.2e-25 122.5 553 23.9
SHI32495 Sapria himalayana HOM05D000141 ORTHO05D004489 3.6e-25 120.9 94 60.6
Gohir.D10G107650 Gossypium hirsutum HOM05D000141 ORTHO05D036128 2.9e-22 111.3 115 50.4
Gorai.011G118000 Gossypium raimondii HOM05D000141 ORTHO05D036128 1.1e-21 109.4 115 49.6
Gohir.A10G068040 Gossypium hirsutum HOM05D000141 ORTHO05D036128 1.0e-19 102.8 113 46.9
Thecc.07G194700 Theobroma cacao HOM05D000141 ORTHO05D016149 1.5e-18 99.0 61 75.4
Pp3c1_18911 Physcomitrium patens HOM05D024533 ORTHO05D024949 1.9e-18 98.6 440 24.3
Mapoly0063s0065 Marchantia polymorpha HOM05D024533 ORTHO05D024949 2.6e-15 88.2 501 21.8
SHI32494 Sapria himalayana HOM05D000141 ORTHO05D004489 1.9e-13 82.0 61 62.3
CBR_g11025 Chara braunii HOM05D000141 ORTHO05D024949 7.8e-12 76.6 238 25.6
CARHR053040 Cardamine hirsuta HOM05D000141 ORTHO05D022222 6.2e-09 67.0 110 41.8
SMO143G0011 Selaginella moellendorffii HOM05D024533 ORTHO05D024949 4.4e-07 60.8 178 28.1


User provided reference genes

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