Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 1.7e-202 709.1 355 100.0
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 3.0e-135 485.7 350 72.3
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 9.6e-134 480.7 347 73.5
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 6.2e-133 478.0 358 70.9
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.6e-131 472.6 362 69.1
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 3.4e-131 472.2 358 69.3
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.9e-130 469.2 350 69.7
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 6.4e-130 468.0 354 69.2
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 8.4e-130 467.6 356 68.8
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 1.4e-129 466.8 358 68.2
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 2.4e-129 466.1 358 67.9
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 2.4e-129 466.1 357 68.9
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 5.4e-129 464.9 357 68.3
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 7.1e-129 464.5 359 68.8
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 7.9e-128 461.1 363 67.5
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 1.0e-127 460.7 359 68.5
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.0e-127 460.7 361 67.9
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.0e-127 460.7 353 67.7
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 1.3e-127 460.3 354 68.4
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 6.7e-127 458.0 354 69.2
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 1.1e-126 457.2 352 67.6
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.5e-126 456.8 353 68.0
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.3e-126 455.7 353 67.7
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 4.3e-126 455.3 361 67.3
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 5.6e-126 454.9 357 68.6
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 9.6e-126 454.1 358 67.6
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 2.1e-125 453.0 353 66.6
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 2.8e-125 452.6 351 67.0
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.8e-125 452.6 349 67.9
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 4.8e-125 451.8 355 67.6
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 8.1e-125 451.1 344 69.5
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 8.1e-125 451.1 359 67.1
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.1e-124 450.7 359 67.1
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.1e-124 450.7 359 67.1
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.1e-124 449.1 359 67.1
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 5.3e-124 448.4 360 66.1
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.9e-124 448.0 361 67.0
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 1.2e-123 447.2 371 65.0
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 2.6e-123 446.0 361 67.3
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 5.8e-123 444.9 356 66.3
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 7.6e-123 444.5 353 66.3
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 1.3e-122 443.7 357 66.4
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 1.7e-122 443.4 344 66.9
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 4.9e-122 441.8 352 66.5
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 4.2e-121 438.7 358 59.2
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 7.1e-121 438.0 355 63.7
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 9.3e-121 437.6 352 66.2
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 9.3e-121 437.6 348 65.2
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 2.1e-120 436.4 370 65.1
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.7e-120 436.0 423 57.0
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.5e-120 435.6 335 66.9
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 3.5e-120 435.6 342 67.0
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 4.6e-120 435.3 349 65.9
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 4.6e-120 435.3 367 62.7
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 7.9e-120 434.5 351 65.5
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.0e-119 434.1 372 62.6
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.3e-119 433.0 348 63.2
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 7.4e-118 427.9 354 64.7
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 9.6e-118 427.6 346 65.3
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 1.6e-117 426.8 339 67.3
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 3.7e-117 425.6 352 65.6
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 3.7e-117 425.6 326 68.7
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.1e-116 422.5 373 60.9
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 5.3e-116 421.8 354 61.9
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.9e-116 421.4 356 60.1
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 2.6e-115 419.5 350 62.3
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 3.4e-115 419.1 360 63.1
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 4.5e-115 418.7 350 62.0
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.0e-114 417.5 350 63.1
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 2.9e-114 416.0 352 62.8
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 2.9e-114 416.0 349 63.0
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 3.8e-114 415.6 324 67.3
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.9e-114 415.2 325 66.8
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.4e-113 413.7 331 65.3
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.4e-113 413.7 325 67.1
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 1.9e-113 413.3 320 61.9
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.2e-113 412.1 325 65.8
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 5.5e-113 411.8 326 67.8
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 1.6e-112 410.2 319 66.8
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 1.6e-112 410.2 341 62.2
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.6e-112 410.2 352 62.5
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 2.1e-112 409.8 357 56.0
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 2.1e-112 409.8 324 66.4
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 2.7e-112 409.5 349 60.7
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.3e-111 407.1 349 57.9
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.8e-111 406.8 424 53.3
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 1.8e-111 406.8 347 61.7
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.9e-111 405.6 360 61.1
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.4e-108 397.1 347 59.9
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.0e-107 393.3 339 61.4
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.7e-106 390.2 333 61.3
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 2.2e-106 389.8 340 59.7
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 3.2e-105 386.0 312 67.0
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 4.2e-105 385.6 340 60.6
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 7.9e-104 381.3 330 59.4
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 6.7e-103 378.3 347 56.8
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 8.8e-103 377.9 347 56.8
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.0e-102 376.7 321 61.4
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 2.0e-102 376.7 353 56.4
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 5.7e-102 375.2 338 60.1
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 6.3e-101 371.7 340 56.5
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 8.2e-101 371.3 322 60.6
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 1.1e-100 370.9 348 57.2
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.1e-100 370.9 347 50.4
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.8e-100 370.2 340 54.7
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 4.1e-100 369.0 353 58.6
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.2e-99 367.5 348 56.9
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.5e-99 367.1 318 61.3
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 4.5e-99 365.5 318 61.0
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 7.7e-99 364.8 214 75.2
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 1.0e-98 364.4 323 61.9
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.0e-98 364.4 357 56.0
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.3e-98 364.0 315 60.0
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 5.0e-98 362.1 335 57.3
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 5.0e-98 362.1 323 61.9
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 3.2e-97 359.4 335 57.0
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 4.2e-97 359.0 416 49.0
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 4.7e-96 355.5 292 64.7
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 5.3e-92 342.0 287 64.5
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.3e-92 342.0 346 59.8
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.0e-91 340.1 263 62.0
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 6.5e-90 335.1 271 59.8
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 5.5e-89 332.0 251 63.3
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 7.2e-89 331.6 322 51.2
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 1.8e-87 327.0 318 58.5
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.6e-86 323.2 274 57.7
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 3.3e-86 322.8 262 61.8
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 9.7e-86 321.2 288 63.2
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.3e-85 320.9 347 53.6
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.1e-84 316.2 335 52.8
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 4.1e-84 315.8 347 50.4
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 2.6e-83 313.2 187 70.1
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 5.0e-82 308.9 342 50.9
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.5e-82 308.5 357 53.2
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 8.5e-82 308.1 318 54.7
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.1e-81 307.8 298 60.1
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 5.2e-79 298.9 319 48.6
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 2.6e-78 296.6 321 47.4
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 1.4e-76 290.8 187 67.4
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 3.1e-76 289.7 358 48.6
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 9.1e-76 288.1 332 49.4
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.6e-75 287.3 327 50.5
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 1.6e-75 287.3 319 52.7
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.3e-74 284.3 329 50.8
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 5.0e-74 282.3 316 51.6
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 8.5e-74 281.6 326 50.6
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 3.2e-73 279.6 349 44.4
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 3.2e-73 279.6 325 48.6
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 6.1e-72 275.4 323 49.5
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 1.8e-71 273.9 318 52.5
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 5.2e-71 272.3 355 46.2
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 1.5e-70 270.8 321 49.5
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 3.4e-70 269.6 332 48.2
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.7e-69 266.2 328 48.8
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.0e-63 246.5 184 63.6
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 1.2e-59 234.6 221 47.5
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 3.5e-59 233.0 347 41.2
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 4.3e-57 226.1 353 41.1
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 2.7e-51 206.8 369 36.0
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.2e-48 198.0 160 59.4
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.2e-48 198.0 108 82.4
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.2e-46 191.4 130 63.8
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 3.4e-46 189.9 102 84.3
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.8e-40 170.2 93 80.6
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.0e-18 98.6 127 40.2
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 4.6e-11 73.2 38 76.3
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 6.0e-11 72.8 48 62.5
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 1.8e-10 71.2 79 58.2
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 3.9e-10 70.1 43 79.1
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 1.3e-08 65.1 35 85.7
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 2.1e-08 64.3 41 73.2
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 2.1e-08 64.3 41 73.2
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 4.8e-08 63.2 45 66.7
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 2.0e-06 57.8 32 84.4


User provided reference genes

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