Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G233 Amborella trichopoda HOM05D006916 ORTHO05D008756 3.3e-84 315.1 167 100.0
TAR633G2378 Trochodendron aralioides HOM05D006916 ORTHO05D008756 2.3e-13 79.7 164 39.0
Nn7g36196 Nelumbo nucifera HOM05D006916 ORTHO05D008756 5.2e-13 78.6 194 34.0
Phvul.005G021800 Phaseolus vulgaris HOM05D006916 ORTHO05D008756 6.7e-13 78.2 192 34.4
TPR.G14555 Trifolium pratense HOM05D006916 ORTHO05D008756 2.6e-12 76.3 161 35.4
CiPaw.13G004800 Carya illinoinensis HOM05D006916 ORTHO05D008756 3.3e-12 75.9 171 37.4
PSO384G3304 Papaver somniferum HOM05D006916 ORTHO05D008756 5.7e-12 75.1 211 33.2
TAR633G2279 Trochodendron aralioides HOM05D006916 ORTHO05D008756 9.7e-12 74.3 165 40.6
vmacro13665 Vaccinium macrocarpon HOM05D006916 ORTHO05D008756 9.7e-12 74.3 178 41.6
Actinidia31062 Actinidia chinensis HOM05D006916 ORTHO05D008756 1.7e-11 73.6 166 34.3
DCAR_022403 Daucus carota HOM05D006916 ORTHO05D008756 3.7e-11 72.4 168 33.9
VMungo1080G1111 Vigna mungo HOM05D006916 ORTHO05D008756 3.7e-11 72.4 186 31.7
Actinidia19391 Actinidia chinensis HOM05D006916 ORTHO05D008756 4.8e-11 72.0 168 36.3
Cfa010762 Carpinus fangiana HOM05D006916 ORTHO05D008756 6.3e-11 71.6 177 35.0
Psat5g212080 Pisum sativum HOM05D006916 ORTHO05D008756 6.3e-11 71.6 180 34.4
MBI01_g18883_MAGBIO Magnolia biondii HOM05D006916 ORTHO05D008756 8.2e-11 71.2 173 34.7
Manes.10G143100 Manihot esculenta HOM05D006916 ORTHO05D008756 8.2e-11 71.2 160 38.8
Duzib268G1492 Durio zibethinus HOM05D006916 ORTHO05D008756 1.1e-10 70.9 183 33.3
Glyma.15G274400 Glycine max HOM05D006916 ORTHO05D008756 1.4e-10 70.5 196 33.7
Potri.001G267200 Populus trichocarpa HOM05D006916 ORTHO05D008756 1.8e-10 70.1 168 40.5
Prupe.2G012900 Prunus persica HOM05D006916 ORTHO05D008756 1.8e-10 70.1 171 39.8
Manes.07G005900 Manihot esculenta HOM05D006916 ORTHO05D008756 2.4e-10 69.7 165 40.0
Medtr3g033530 Medicago truncatula HOM05D006916 ORTHO05D008756 2.4e-10 69.7 180 38.3
Thecc.01G411100 Theobroma cacao HOM05D006916 ORTHO05D008756 2.4e-10 69.7 180 40.0
Gohir.D08G165500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 5.3e-10 68.6 184 37.0
Potri.009G061300 Populus trichocarpa HOM05D006916 ORTHO05D008756 5.3e-10 68.6 172 40.1
Migut.O00900 Erythranthe guttata HOM05D006916 ORTHO05D008756 7.0e-10 68.2 166 31.9
Migut.M00475 Erythranthe guttata HOM05D006916 ORTHO05D008756 9.1e-10 67.8 166 31.9
FAN03G0110 Fragaria x ananassa HOM05D006916 ORTHO05D008756 9.1e-10 67.8 170 33.5
RcHm_v2.0_Chr1g0315961 Rosa chinensis HOM05D006916 ORTHO05D008756 9.1e-10 67.8 172 33.7
Ca_14513_v3 Cicer arietinum L. HOM05D006916 ORTHO05D008756 1.2e-09 67.4 186 32.3
Gorai.004G172600 Gossypium raimondii HOM05D006916 ORTHO05D008756 1.2e-09 67.4 185 37.3
FvH4_7g01030 Fragaria vesca HOM05D006916 ORTHO05D008756 2.0e-09 66.6 172 32.0
Dinv43446 Davidia involucrata HOM05D006916 ORTHO05D008756 2.7e-09 66.2 134 38.1
FAN06G2642 Fragaria x ananassa HOM05D006916 ORTHO05D008756 2.7e-09 66.2 171 32.2
MD07G1010600 Malus domestica HOM05D006916 ORTHO05D008756 2.7e-09 66.2 177 33.9
Haze_03209 Corylus avellana HOM05D006916 ORTHO05D008756 3.5e-09 65.9 171 34.5
Gohir.A08G144500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 3.5e-09 65.9 185 37.3
Duzib138G0699 Durio zibethinus HOM05D006916 ORTHO05D008756 4.5e-09 65.5 163 40.5
CSS0007374 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 5.9e-09 65.1 201 35.8
Rhsim07G0055500 Rhododendron simsii HOM05D006916 ORTHO05D008756 5.9e-09 65.1 191 33.0
Sabra09G0045200 Salix brachista HOM05D006916 ORTHO05D008756 5.9e-09 65.1 167 38.3
Aqoxy1G00267 Aquilegia oxysepala HOM05D006916 ORTHO05D008756 1.3e-08 63.9 210 32.9
FAN01G0033 Fragaria x ananassa HOM05D006916 ORTHO05D008756 1.3e-08 63.9 171 31.6
QL04p006637 Quercus lobata HOM05D006916 ORTHO05D008756 1.7e-08 63.5 184 35.9
Migut.M00564 Erythranthe guttata HOM05D006916 ORTHO05D008756 2.2e-08 63.2 178 34.8
Migut.O00691 Erythranthe guttata HOM05D006916 ORTHO05D008756 2.9e-08 62.8 165 32.7
MD02G1312000 Malus domestica HOM05D006916 ORTHO05D008756 2.9e-08 62.8 169 37.3
Lsat_1_v5_gn_1_107281 Lactuca sativa HOM05D006916 ORTHO05D008756 3.8e-08 62.4 181 32.6
Dinv09357 Davidia involucrata HOM05D006916 ORTHO05D008756 8.5e-08 61.2 183 28.4
PGR044G2091 Punica granatum HOM05D006916 ORTHO05D008756 8.5e-08 61.2 133 36.1
arahy.Tifrunner.gnm1.ann1.P93ESD Arachis hypogaea HOM05D006916 ORTHO05D008756 3.2e-07 59.3 166 31.9
MELO3C023975.2 Cucumis melo HOM05D006916 ORTHO05D008756 3.2e-07 59.3 176 34.7
HanXRQChr01g0016271 Helianthus annuus HOM05D006916 ORTHO05D008756 3.2e-07 59.3 179 35.2
ECA248G0998 Erigeron canadensis HOM05D006916 ORTHO05D008756 4.2e-07 58.9 148 33.8
arahy.Tifrunner.gnm1.ann1.5BB2HR Arachis hypogaea HOM05D006916 ORTHO05D008756 7.2e-07 58.2 166 31.3
Os03g0216500 Oryza sativa ssp. japonica HOM05D006916 ORTHO05D008756 7.2e-07 58.2 169 36.1
GSVIVG01032090001 Vitis vinifera HOM05D006916 ORTHO05D008756 7.2e-07 58.2 167 38.9
Zm00001eb008770 Zea mays HOM05D006916 ORTHO05D008756 9.4e-07 57.8 162 34.0
CsaV3_3G032160 Cucumis sativus L. HOM05D006916 ORTHO05D008756 1.6e-06 57.0 177 33.3
Eucgr.J01277 Eucalyptus grandis HOM05D006916 ORTHO05D008756 3.6e-06 55.8 173 35.3
MSTRG.17032 Avicennia marina HOM05D006916 ORTHO05D008756 8.0e-06 54.7 179 28.5


User provided reference genes

Program Settings