Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 2.4e-66 255.4 129 100.0
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 4.2e-55 218.0 126 83.3
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 3.6e-54 214.9 126 82.5
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 4.7e-54 214.5 126 81.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.4e-53 213.0 126 79.4
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 6.7e-53 210.7 125 83.2
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 7.4e-52 207.2 127 78.7
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 2.8e-51 205.3 125 76.8
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.8e-51 205.3 125 78.4
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 4.8e-51 204.5 125 77.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 6.3e-51 204.1 126 74.6
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 6.3e-51 204.1 125 76.0
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 6.3e-51 204.1 126 76.2
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 8.2e-51 203.8 125 76.0
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.4e-50 203.0 126 77.8
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.4e-50 203.0 125 78.4
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.8e-50 202.6 126 77.8
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.8e-50 202.6 126 77.0
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 2.4e-50 202.2 127 74.8
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 4.1e-50 201.4 127 76.4
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 5.3e-50 201.1 126 74.6
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 5.3e-50 201.1 125 76.0
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 5.3e-50 201.1 129 76.0
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 5.3e-50 201.1 125 76.0
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 5.3e-50 201.1 125 76.0
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 1.2e-49 199.9 129 74.4
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.2e-49 199.9 125 76.0
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.0e-49 199.1 126 77.0
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.0e-49 199.1 126 77.0
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 2.0e-49 199.1 127 73.2
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 2.6e-49 198.7 128 75.0
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 4.5e-49 198.0 126 73.8
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 7.7e-49 197.2 129 76.7
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.0e-48 196.8 119 77.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.3e-48 196.4 127 73.2
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.3e-48 196.4 127 73.2
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 2.9e-48 195.3 132 72.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 5.0e-48 194.5 129 72.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.1e-47 193.4 126 70.6
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.9e-47 192.6 127 71.7
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 7.2e-47 190.7 137 66.4
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.6e-46 189.5 128 73.4
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.7e-46 188.0 127 73.2
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 6.1e-46 187.6 115 73.0
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 8.0e-46 187.2 125 72.0
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.0e-45 186.8 128 73.4
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.0e-45 186.8 126 70.6
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.0e-45 186.8 128 71.1
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-45 186.8 129 72.1
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.0e-45 186.8 111 75.7
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.4e-45 186.4 129 72.1
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.4e-45 186.4 111 82.0
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.8e-45 186.0 129 72.1
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.8e-45 186.0 134 67.2
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.8e-45 186.0 128 71.1
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.3e-45 185.7 125 72.8
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.0e-45 184.9 115 72.2
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 4.0e-45 184.9 125 72.0
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.0e-45 184.9 125 72.0
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.0e-45 184.9 125 72.0
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.0e-45 184.9 125 72.0
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.0e-45 184.9 125 72.0
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 4.0e-45 184.9 115 76.5
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 6.7e-45 184.1 126 69.0
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 6.7e-45 184.1 125 72.0
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 6.7e-45 184.1 125 72.0
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 6.7e-45 184.1 125 72.0
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.2e-44 183.3 125 71.2
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.2e-44 183.3 125 72.0
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.2e-44 183.3 125 72.0
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.5e-44 183.0 125 69.6
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.5e-44 183.0 114 75.4
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 2.6e-44 182.2 125 70.4
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 3.3e-44 181.8 128 71.1
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 3.3e-44 181.8 128 71.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 3.3e-44 181.8 119 72.3
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 9.7e-44 180.3 114 76.3
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.3e-43 179.9 127 70.9
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.3e-43 179.9 130 66.2
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.7e-43 179.5 137 67.9
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 2.2e-43 179.1 124 71.8
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 2.2e-43 179.1 124 71.8
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.2e-43 179.1 118 72.0
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 2.8e-43 178.7 134 64.9
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 3.7e-43 178.3 126 70.6
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 3.7e-43 178.3 134 64.9
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 8.2e-43 177.2 121 68.6
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.1e-42 176.8 127 70.1
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.8e-42 176.0 126 69.8
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.4e-42 175.6 129 69.0
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.1e-42 175.3 119 71.4
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 9.1e-42 173.7 120 66.7
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.0e-41 172.6 119 67.2
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.0e-41 172.6 119 67.2
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-41 172.2 105 77.1
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 2.7e-41 172.2 114 70.2
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 4.5e-41 171.4 115 73.9
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 5.9e-41 171.0 132 65.2
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 5.9e-41 171.0 118 66.9
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 7.7e-41 170.6 120 67.5
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.3e-40 169.9 129 68.2
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 4.2e-39 164.9 127 66.9
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 7.2e-39 164.1 129 65.9
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 2.3e-37 159.1 101 74.3
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 3.0e-37 158.7 101 76.2
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 8.8e-37 157.1 102 74.5
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 5.7e-36 154.5 95 74.7
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 4.1e-34 148.3 123 63.4
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 4.1e-34 148.3 86 80.2
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.0e-33 146.0 102 71.6
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 5.9e-33 144.4 107 67.3
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 7.7e-33 144.1 102 71.6
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.3e-32 142.5 95 69.5
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 5.5e-31 137.9 109 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 7.2e-31 137.5 123 54.5
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 4.7e-30 134.8 120 55.0
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 4.0e-29 131.7 123 49.6
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 7.5e-28 127.5 118 52.5
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.0e-16 90.5 127 40.9
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.1e-15 87.0 98 45.9
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 3.3e-15 85.5 69 60.9
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.6e-14 83.2 52 73.1
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.2e-09 67.0 61 52.5


User provided reference genes

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