Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 5.0e-77 291.2 164 100.0
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 4.4e-25 118.6 144 52.8
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.7e-24 116.7 143 56.6
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.7e-24 116.7 145 53.8
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 2.2e-24 116.3 146 59.6
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.9e-24 115.9 150 56.0
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 2.9e-24 115.9 136 55.9
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 2.9e-24 115.9 150 51.3
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.4e-23 113.6 148 52.7
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.4e-23 113.6 145 51.7
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.9e-23 113.2 143 51.0
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.9e-23 113.2 143 51.0
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 2.4e-23 112.8 148 52.7
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 4.1e-23 112.1 145 51.0
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.4e-23 111.7 145 57.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 7.1e-23 111.3 147 49.7
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.6e-22 110.2 143 51.7
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.7e-22 109.4 146 50.7
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.3e-21 107.1 146 55.5
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 5.1e-21 105.1 145 52.4
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 1.5e-20 103.6 141 49.6
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.9e-20 103.2 147 53.7
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.9e-20 103.2 108 56.5
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.5e-20 102.8 144 48.6
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.3e-20 102.4 143 48.3
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 3.3e-20 102.4 135 51.9
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 3.3e-20 102.4 145 48.3
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 4.3e-20 102.1 145 49.7
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 4.3e-20 102.1 148 55.4
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.6e-20 101.7 147 55.1
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 5.6e-20 101.7 133 51.1
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 7.3e-20 101.3 147 55.1
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.3e-20 101.3 153 45.8
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 7.3e-20 101.3 145 48.3
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 9.5e-20 100.9 142 47.2
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 9.5e-20 100.9 142 47.2
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 9.5e-20 100.9 142 50.7
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 9.5e-20 100.9 146 47.3
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 9.5e-20 100.9 143 47.6
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-19 100.5 147 53.7
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.6e-19 100.1 145 48.3
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.1e-19 99.8 148 48.6
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 2.1e-19 99.8 146 47.3
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 2.8e-19 99.4 145 51.0
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 4.7e-19 98.6 151 53.6
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 4.7e-19 98.6 136 53.7
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.1e-19 97.8 151 53.0
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 8.1e-19 97.8 142 50.0
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.4e-18 97.1 132 56.1
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.4e-18 97.1 147 52.4
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 1.8e-18 96.7 148 48.0
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.8e-18 96.7 93 63.4
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.8e-18 96.7 150 49.3
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.1e-18 95.9 147 53.7
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 3.1e-18 95.9 99 59.6
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 4.0e-18 95.5 145 51.7
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 5.2e-18 95.1 143 48.3
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 3.4e-17 92.4 146 47.3
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 3.4e-17 92.4 143 52.4
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 7.6e-17 91.3 101 56.4
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.3e-16 90.5 150 47.3
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 2.2e-16 89.7 134 55.2
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 2.2e-16 89.7 105 63.8
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 2.2e-16 89.7 146 41.8
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.2e-16 89.7 137 45.3
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.2e-16 89.7 137 46.0
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.1e-15 87.4 84 60.7
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 2.4e-15 86.3 129 54.3
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 4.2e-15 85.5 143 42.0
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 5.4e-15 85.1 97 54.6
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 9.2e-15 84.3 106 50.0
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.2e-14 84.0 130 41.5
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 2.7e-14 82.8 89 66.3
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 4.6e-14 82.0 142 50.0
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 6.0e-14 81.6 145 50.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 6.0e-14 81.6 137 43.1
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 7.8e-14 81.3 143 44.1
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 1.0e-13 80.9 129 47.3
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.0e-13 80.9 137 43.1
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.0e-13 80.9 109 51.4
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.3e-13 80.5 104 61.5
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.3e-13 80.5 137 43.1
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 2.3e-13 79.7 144 49.3
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 3.9e-13 79.0 141 51.8
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 3.9e-13 79.0 148 41.2
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.9e-13 79.0 96 54.2
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 8.7e-13 77.8 70 57.1
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.1e-12 77.4 142 40.1
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.9e-12 76.6 140 48.6
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.6e-11 73.6 128 51.6
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 1.6e-11 73.6 154 36.4
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 4.7e-11 72.0 139 47.5
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.4e-10 70.5 149 44.3
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 1.2e-09 67.4 133 38.3
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.6e-09 66.2 164 37.2
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.6e-09 64.7 144 38.2
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.3e-08 63.9 95 51.6
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 2.2e-08 63.2 138 39.1
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 2.9e-08 62.8 82 56.1
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.4e-07 60.5 146 43.2
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.9e-07 60.1 112 48.2
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 5.4e-07 58.5 104 49.0
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 7.1e-07 58.2 100 50.0
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 1.6e-06 57.0 41 73.2
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 3.5e-06 55.8 111 45.0


User provided reference genes

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