Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 7.2e-70 266.9 118 100.0
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 1.1e-38 163.3 97 73.2
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 3.3e-38 161.8 97 72.2
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.2e-37 159.8 117 61.5
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 2.1e-37 159.1 77 84.4
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 2.1e-37 159.1 77 84.4
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 2.1e-37 159.1 97 71.1
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 2.8e-37 158.7 97 70.1
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 3.6e-37 158.3 95 71.6
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.6e-37 158.3 77 84.4
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 6.2e-37 157.5 77 84.4
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 8.1e-37 157.1 77 83.1
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 8.1e-37 157.1 106 67.9
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 8.1e-37 157.1 97 70.1
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 8.1e-37 157.1 97 70.1
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.1e-36 156.8 77 85.7
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 1.8e-36 156.0 97 71.1
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.8e-36 156.0 107 66.4
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 2.3e-36 155.6 77 83.1
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.3e-36 155.6 76 84.2
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 3.1e-36 155.2 97 69.1
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 3.1e-36 155.2 97 69.1
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 3.1e-36 155.2 77 83.1
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 3.1e-36 155.2 77 83.1
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 3.1e-36 155.2 97 69.1
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 4.0e-36 154.8 77 81.8
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 4.0e-36 154.8 77 81.8
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 5.2e-36 154.5 114 62.3
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 5.2e-36 154.5 77 81.8
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.8e-36 154.1 97 66.0
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 8.9e-36 153.7 77 81.8
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 8.9e-36 153.7 97 66.0
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 8.9e-36 153.7 77 83.1
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 1.2e-35 153.3 77 80.5
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.2e-35 153.3 77 83.1
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 1.2e-35 153.3 77 81.8
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.2e-35 153.3 77 80.5
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.5e-35 152.9 97 66.0
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 1.5e-35 152.9 78 80.8
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 1.5e-35 152.9 97 69.1
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.0e-35 152.5 97 69.1
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 2.6e-35 152.1 77 80.5
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 2.6e-35 152.1 96 69.8
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 2.6e-35 152.1 82 76.8
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 3.4e-35 151.8 98 63.3
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 4.4e-35 151.4 98 65.3
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 5.8e-35 151.0 77 77.9
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 5.8e-35 151.0 97 69.1
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 5.8e-35 151.0 77 79.2
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 7.6e-35 150.6 97 67.0
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 9.9e-35 150.2 77 80.5
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 9.9e-35 150.2 77 79.2
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 1.7e-34 149.4 94 69.1
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.8e-34 148.3 77 77.9
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 3.8e-34 148.3 77 77.9
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 6.4e-34 147.5 76 80.3
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.9e-33 146.0 77 77.9
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 2.4e-33 145.6 77 75.3
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 2.4e-33 145.6 97 67.0
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 3.2e-33 145.2 97 63.9
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 9.2e-33 143.7 77 77.9
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.2e-32 143.3 95 63.2
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 2.1e-32 142.5 77 75.3
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 7.8e-32 140.6 77 76.6
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 6.2e-29 131.0 77 70.1
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.4e-28 129.0 97 57.7
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.5e-27 126.3 77 70.1
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.6e-19 99.0 54 74.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 3.2e-17 92.0 68 61.8
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 3.2e-17 92.0 65 60.0
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 1.6e-16 89.7 65 56.9
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 3.5e-08 62.0 29 86.2
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 5.1e-07 58.2 38 57.9


User provided reference genes

Program Settings