Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 0.0e+00 2239.9 1144 100.0
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 9.2e-295 1017.3 1127 51.4
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 1.2e-281 973.8 1125 47.9
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 5.1e-277 958.4 1125 49.0
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 3.6e-275 952.2 1119 47.6
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 6.0e-270 934.9 1128 47.6
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 4.0e-266 922.2 1100 48.0
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 2.4e-263 912.9 1142 46.1
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 2.4e-263 912.9 1120 46.0
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 3.2e-263 912.5 1128 46.5
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 1.4e-258 897.1 1139 46.0
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 5.3e-258 895.2 1126 46.0
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 9.0e-258 894.4 1129 45.6
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 4.5e-257 892.1 1122 45.2
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 7.6e-257 891.3 1124 45.2
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 3.8e-256 889.0 1134 45.3
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 4.9e-256 888.6 1123 45.1
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 1.0e-253 880.9 1126 45.4
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 1.3e-251 874.0 1133 44.7
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 2.4e-250 869.8 1125 43.9
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 6.9e-250 868.2 1125 43.7
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.5e-249 865.5 1129 43.6
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 3.2e-247 859.4 1125 44.5
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.2e-247 859.0 1129 43.0
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 7.1e-247 858.2 1130 43.1
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.0e-245 854.4 1145 44.8
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 3.9e-245 852.4 1139 44.3
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 8.7e-245 851.3 1123 44.0
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 8.7e-245 851.3 1124 42.1
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 3.3e-244 849.4 1139 43.8
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 5.6e-244 848.6 1128 42.7
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.1e-243 846.7 1129 44.9
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 5.8e-241 838.6 1138 43.7
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 6.5e-240 835.1 1142 43.0
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 4.6e-238 828.9 1140 42.7
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 4.6e-238 828.9 1120 42.3
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 4.6e-238 828.9 1130 42.3
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 1.6e-235 820.5 1128 43.1
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.1e-234 817.8 1127 44.2
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 3.4e-233 812.8 1142 42.5
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 7.6e-233 811.6 1125 40.1
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 1.3e-232 810.8 1138 41.7
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.2e-232 810.1 1127 41.7
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 3.8e-232 809.3 1126 42.0
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 1.6e-230 803.9 1128 43.2
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 2.1e-230 803.5 1137 41.9
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 4.6e-230 802.4 1127 41.1
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 6.1e-230 802.0 1125 39.5
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 3.0e-229 799.7 1058 44.0
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 6.7e-229 798.5 1126 42.8
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 3.3e-228 796.2 1128 43.2
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 1.6e-227 793.9 1129 41.3
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 8.2e-227 791.6 1059 44.1
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 7.7e-225 785.0 1152 42.4
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 1.3e-224 784.3 1127 42.7
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 5.0e-224 782.3 1149 42.3
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 1.6e-222 777.3 1143 37.9
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 2.6e-220 770.0 1149 40.1
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 8.2e-219 765.0 1131 41.9
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 8.2e-219 765.0 1062 42.4
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.1e-218 763.1 984 45.2
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 6.9e-218 761.9 1125 38.8
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 9.1e-218 761.5 1012 45.3
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 9.1e-218 761.5 1092 40.4
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.0e-216 758.1 901 46.7
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.9e-215 753.8 1137 40.3
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 1.4e-213 747.7 1125 41.1
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 1.3e-211 741.1 855 48.4
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 1.3e-211 741.1 983 43.9
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 2.0e-209 733.8 1137 40.7
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 8.8e-205 718.4 1140 38.4
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 7.5e-204 715.3 1168 38.5
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 2.2e-200 703.7 1123 38.8
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.9e-187 659.4 882 42.0
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 4.9e-187 659.4 1004 40.8
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 3.7e-179 633.3 900 42.0
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 2.4e-178 630.6 761 45.9
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 7.8e-177 625.5 1131 35.7
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 2.8e-174 617.1 1107 34.4
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 3.6e-174 616.7 1148 35.2
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 2.6e-172 610.5 978 39.6
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 7.8e-169 599.0 1352 32.5
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 5.2e-165 586.3 758 44.7
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 2.2e-147 527.7 773 40.5
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 5.8e-140 503.1 798 37.7
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 6.0e-137 493.0 635 42.2
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.8e-136 491.5 775 40.1
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 8.4e-131 472.6 930 34.3
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.2e-130 470.3 1129 31.0
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 5.0e-107 393.7 494 47.2
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 2.2e-99 368.2 492 44.3
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.5e-87 328.9 678 33.2
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.4e-77 295.8 370 46.5
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.6e-73 281.2 409 39.4
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.6e-73 281.2 368 44.6
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 8.0e-73 280.0 353 41.4
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 3.4e-71 274.6 364 44.2
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.5e-71 273.5 598 32.8
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.7e-70 272.3 599 33.7
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.1e-66 259.6 314 47.1
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 3.1e-64 251.5 323 43.0
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.7e-62 245.7 261 51.0
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 4.9e-62 244.2 304 44.7
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 3.5e-52 211.5 256 47.3
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 3.0e-51 208.4 248 50.4
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 6.6e-51 207.2 274 43.8
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.6e-49 201.4 376 37.2
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 6.0e-36 157.5 322 35.7
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.1e-34 153.3 218 38.5
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 4.3e-34 151.4 139 57.6
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 8.1e-33 147.1 376 30.6
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 1.8e-32 146.0 462 28.6
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 1.1e-26 126.7 182 37.9
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 1.9e-26 125.9 178 40.4
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.1e-21 110.2 143 39.9
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.9e-21 109.4 309 28.5
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 6.0e-20 104.4 157 35.0
CBR_g41430 Chara braunii HOM05D000019 ORTHO05D000048 7.9e-20 104.0 259 29.7
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 1.5e-15 89.7 451 23.3
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.5e-15 89.7 138 38.4
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 2.6e-15 89.0 151 40.4
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.1e-13 83.6 171 32.7
SEGI_21308 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 1.8e-11 76.3 83 47.0
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 1.8e-08 66.2 102 34.3
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.8e-08 66.2 102 34.3
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.0e-07 62.8 102 33.3
arahy.Tifrunner.gnm1.ann1.N4MAIX Arachis hypogaea HOM05D005711 ORTHO05D007125 4.9e-06 58.2 72 44.4


User provided reference genes

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