Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 2.5e-53 211.8 106 100.0
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 1.2e-18 96.7 106 54.7
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 6.4e-17 90.9 107 43.9
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 6.4e-17 90.9 101 43.6
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 8.3e-17 90.5 108 47.2
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 1.1e-16 90.1 101 51.5
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 5.4e-16 87.8 104 45.2
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 2.1e-15 85.9 109 44.0
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 2.1e-15 85.9 100 51.0
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 6.0e-15 84.3 103 43.7
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 7.8e-15 84.0 107 43.0
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.7e-14 82.8 109 43.1
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 1.7e-14 82.8 115 44.3
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 2.3e-14 82.4 105 41.9
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 3.9e-14 81.6 108 40.7
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 6.6e-14 80.9 103 44.7
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 6.6e-14 80.9 104 41.3
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 6.6e-14 80.9 97 40.2
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 8.6e-14 80.5 111 37.8
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 1.1e-13 80.1 118 38.1
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 3.3e-13 78.6 108 41.7
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 4.3e-13 78.2 113 38.1
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 7.3e-13 77.4 100 42.0
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 7.3e-13 77.4 129 34.9
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 7.3e-13 77.4 117 35.9
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 1.6e-12 76.3 92 46.7
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 1.6e-12 76.3 107 40.2
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 1.6e-12 76.3 107 42.1
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 2.1e-12 75.9 104 41.3
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 3.6e-12 75.1 92 42.4
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.4e-11 73.2 92 44.6
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.4e-11 73.2 92 45.7
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 1.4e-11 73.2 92 45.7
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 3.1e-11 72.0 113 35.4
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 3.1e-11 72.0 105 38.1
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 4.0e-11 71.6 107 37.4
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 8.9e-11 70.5 111 39.6
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 2.0e-10 69.3 103 45.6
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 9.9e-10 67.0 94 37.2
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 9.9e-10 67.0 108 37.0
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 2.2e-09 65.9 128 30.5
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 3.8e-09 65.1 87 40.2
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 8.4e-09 63.9 138 30.4
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.9e-08 62.8 107 37.4
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 2.4e-08 62.4 83 42.2
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.6e-07 59.7 89 41.6
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 2.7e-07 58.9 102 39.2
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 4.6e-07 58.2 78 42.3
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 4.6e-07 58.2 90 38.9
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 6.0e-07 57.8 81 38.3
ECA233G4326 Erigeron canadensis HOM05D008446 ORTHO05D010616 7.8e-07 57.4 124 31.5
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 3.0e-06 55.5 85 41.2


User provided reference genes

Program Settings