Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.1e-308 1061.6 571 100.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-193 680.2 570 64.4
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 5.2e-190 668.3 570 64.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.9e-187 659.8 571 62.7
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.6e-186 656.8 570 62.3
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.5e-184 649.4 570 62.3
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 5.6e-184 648.3 573 63.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.8e-182 643.3 570 62.8
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 5.2e-182 641.7 571 62.3
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 6.8e-182 641.3 571 62.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.5e-181 640.2 570 61.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.6e-181 639.4 570 62.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.4e-181 638.6 570 60.4
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.9e-180 636.0 573 60.6
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.2e-179 632.5 570 59.1
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 4.1e-179 632.1 565 61.8
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.4e-179 631.7 569 61.0
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 5.4e-179 631.7 570 59.8
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 2.1e-178 629.8 572 61.2
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.7e-178 629.4 571 60.4
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.5e-178 629.0 564 62.1
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 4.6e-178 628.6 571 62.9
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 6.0e-178 628.2 570 60.2
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 7.8e-178 627.9 572 60.1
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.0e-177 627.5 570 60.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.0e-177 625.9 571 60.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 6.6e-177 624.8 574 60.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 8.6e-177 624.4 575 60.7
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.1e-176 624.0 570 60.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.1e-176 624.0 570 59.6
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-176 623.6 564 61.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.9e-176 623.2 570 59.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.3e-176 622.5 564 61.5
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.3e-176 622.5 571 60.1
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 7.3e-176 621.3 571 59.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-175 620.2 564 61.2
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.7e-175 618.6 575 61.2
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 6.2e-175 618.2 564 60.5
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.1e-175 617.8 572 60.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.1e-174 617.5 569 59.2
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-174 617.5 570 59.6
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.4e-174 617.1 565 58.6
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.5e-173 613.6 559 61.4
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.6e-173 612.8 565 59.8
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.6e-173 612.8 569 58.9
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.4e-173 612.5 574 58.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.4e-173 612.1 574 57.8
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.8e-173 611.7 569 58.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 9.9e-173 610.9 573 59.5
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.7e-172 610.1 572 61.0
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.2e-172 609.8 569 59.4
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-172 609.8 579 59.1
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.2e-172 609.8 571 58.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.8e-172 609.0 597 57.8
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-171 607.4 564 60.5
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.4e-171 606.3 594 55.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.2e-171 605.9 567 58.6
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.1e-171 604.7 580 57.4
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.2e-170 604.0 575 58.3
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 2.1e-170 603.2 571 57.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 3.5e-170 602.4 572 58.2
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.0e-169 600.9 571 57.6
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.3e-169 599.7 570 59.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 3.9e-169 599.0 570 57.2
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.1e-169 598.6 569 57.5
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 6.6e-169 598.2 645 53.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 6.6e-169 598.2 572 57.7
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 7.3e-168 594.7 570 56.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 9.6e-168 594.3 574 59.6
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.8e-167 592.8 569 57.1
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 4.8e-167 592.0 573 57.8
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 4.8e-167 592.0 572 58.4
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.1e-166 590.9 572 58.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.4e-166 590.5 570 56.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.0e-165 586.6 569 56.4
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 4.4e-165 585.5 570 56.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 7.6e-165 584.7 569 57.3
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.9e-164 582.8 572 56.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.2e-163 579.3 571 56.4
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.1e-162 576.6 571 57.1
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 3.9e-161 572.4 584 56.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 4.8e-159 565.5 570 55.8
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 4.8e-159 565.5 570 55.8
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 5.3e-158 562.0 569 55.2
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.3e-158 562.0 569 55.2
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 5.3e-158 562.0 569 55.2
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.9e-156 556.2 533 59.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 4.6e-154 548.9 641 51.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.8e-153 547.0 536 56.3
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.0e-153 546.2 570 55.3
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.6e-152 542.0 571 54.6
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 4.8e-151 538.9 565 56.1
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.5e-141 507.3 489 57.9
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.1e-139 501.1 513 55.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 6.1e-138 495.4 526 54.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.0e-113 413.3 456 54.6
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.5e-112 411.0 587 41.4
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 4.4e-112 409.5 576 43.1
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 5.7e-112 409.1 417 54.0
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.0e-97 361.7 591 38.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.0e-97 360.1 237 77.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 5.7e-96 355.9 590 37.3
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.6e-91 339.3 412 50.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 8.9e-89 332.0 219 73.1
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.9e-87 326.2 566 35.9
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.4e-79 299.3 303 61.7
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.6e-69 268.1 255 56.1
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 4.6e-69 266.5 174 73.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.0e-68 263.8 297 52.2
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.8e-65 254.6 220 63.2
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.7e-53 214.2 380 40.8
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 8.4e-47 192.6 592 28.2
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 5.4e-46 189.9 163 62.6
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 8.7e-44 182.6 208 51.4
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.5e-29 134.0 155 50.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 4.6e-29 133.7 153 57.5
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-20 105.5 66 72.7
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 5.3e-09 67.0 56 67.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 2.0e-08 65.1 41 73.2


User provided reference genes

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