Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.5e-49 199.1 98 100.0
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 7.2e-39 163.7 96 78.1
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.1e-38 162.2 96 80.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 6.1e-38 160.6 96 78.1
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.3e-37 158.7 96 77.1
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.9e-37 157.9 94 76.6
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 6.7e-37 157.1 96 77.1
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 74.5
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 3.3e-36 154.8 96 76.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.7e-36 154.1 96 77.1
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 7.4e-36 153.7 98 75.5
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 9.7e-36 153.3 96 75.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 3.7e-35 151.4 94 75.5
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 3.7e-35 151.4 97 74.2
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 71.9
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 71.9
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 8.2e-35 150.2 92 75.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.1e-34 149.8 93 76.3
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.4e-34 149.4 92 75.0
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.8e-34 149.1 99 76.8
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 3.1e-34 148.3 91 78.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.1e-34 147.9 90 80.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 5.3e-34 147.5 96 75.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.3e-34 147.5 99 72.7
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 6.9e-34 147.1 94 77.7
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 6.9e-34 147.1 96 72.9
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 70.7
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 70.7
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 9.1e-34 146.7 99 70.7
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.2e-33 146.4 100 72.0
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.5e-33 146.0 97 75.3
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.5e-33 146.0 94 73.4
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.0e-33 145.6 96 70.8
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.0e-33 145.6 96 74.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.6e-33 145.2 96 71.9
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 2.6e-33 145.2 96 74.0
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 2.6e-33 145.2 97 71.1
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-33 144.8 91 74.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 3.4e-33 144.8 91 74.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 3.4e-33 144.8 91 74.7
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 3.4e-33 144.8 96 70.8
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.5e-33 144.4 96 71.9
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 4.5e-33 144.4 96 69.8
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 4.5e-33 144.4 97 72.2
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 5.9e-33 144.1 97 74.2
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 5.9e-33 144.1 93 75.3
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 5.9e-33 144.1 97 70.1
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 7.7e-33 143.7 94 72.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 7.7e-33 143.7 93 74.2
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.7e-33 143.7 99 69.7
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.0e-32 143.3 97 68.0
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.0e-32 143.3 96 70.8
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.0e-32 143.3 96 69.8
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 96 71.9
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.0e-32 143.3 97 70.1
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.7e-32 142.5 91 74.7
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.7e-32 142.5 94 71.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.9e-32 141.7 88 76.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 2.9e-32 141.7 123 60.2
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 3.8e-32 141.4 96 70.8
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 3.8e-32 141.4 95 72.6
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 3.8e-32 141.4 95 66.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 5.0e-32 141.0 93 76.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.4e-31 139.4 92 68.5
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.9e-31 139.0 91 72.5
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 2.5e-31 138.7 93 66.7
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.5e-31 138.7 87 72.4
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.2e-31 138.3 94 69.1
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.2e-31 138.3 91 69.2
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 7.2e-31 137.1 96 67.7
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 7.2e-31 137.1 93 69.9
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 9.4e-31 136.7 98 68.4
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.6e-30 136.0 94 68.1
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.1e-30 135.6 96 68.8
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-30 135.6 96 67.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.1e-30 135.6 96 67.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.1e-30 135.6 96 67.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.1e-30 135.6 96 67.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 2.1e-30 135.6 94 68.1
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 4.7e-30 134.4 96 66.7
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 4.7e-30 134.4 100 64.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 6.1e-30 134.0 96 68.8
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 6.1e-30 134.0 94 69.1
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 6.1e-30 134.0 98 67.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 6.1e-30 134.0 91 68.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 6.1e-30 134.0 80 80.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.8e-29 132.5 93 68.8
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 2.3e-29 132.1 94 68.1
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.0e-29 131.7 93 68.8
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.0e-29 131.7 80 77.5
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.0e-29 131.7 78 79.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.1e-28 129.8 87 70.1
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.0e-28 129.0 102 63.7
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.4e-28 127.9 93 67.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 4.4e-28 127.9 93 67.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 5.7e-28 127.5 93 67.7
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 7.4e-28 127.1 78 79.5
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 9.7e-28 126.7 93 67.7
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 9.7e-28 126.7 93 67.7
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.2e-27 125.6 87 70.1
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 6.3e-27 124.0 80 73.8
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.5e-25 117.9 84 66.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.2e-24 115.5 88 65.9
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.8e-24 114.8 80 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 8.5e-24 113.6 82 64.6
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.6e-20 102.1 63 76.2
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 2.6e-20 102.1 84 52.4
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.3e-20 101.7 102 55.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.7e-19 99.4 88 56.8
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 4.5e-17 91.3 72 61.1
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 4.5e-17 91.3 86 53.5
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.2e-15 85.1 111 45.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 8.8e-13 77.0 84 48.8
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.7e-12 74.3 46 71.7
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.4e-10 69.7 63 58.7
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.2e-08 62.4 74 41.9
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 6.5e-08 60.8 38 68.4
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 5.5e-07 57.8 65 46.2
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 3.6e-06 55.1 41 63.4


User provided reference genes

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