Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 2.2e-76 288.9 148 100.0
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.7e-55 218.4 131 86.3
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.2e-48 196.8 131 77.1
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 1.2e-48 196.8 131 76.3
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.5e-48 196.4 131 77.1
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.5e-48 196.4 131 75.6
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.5e-48 196.4 131 76.3
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 3.4e-48 195.3 131 76.3
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.4e-48 194.9 131 74.8
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.4e-48 194.9 131 76.3
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 5.7e-48 194.5 131 75.6
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 7.5e-48 194.1 131 76.3
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 9.8e-48 193.7 131 75.6
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.3e-47 193.4 131 74.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.3e-47 193.4 131 72.5
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.3e-47 193.4 131 74.0
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.3e-47 193.4 131 74.0
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.7e-47 193.0 131 74.8
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.7e-47 193.0 131 74.0
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 2.2e-47 192.6 131 74.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 2.8e-47 192.2 131 73.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.8e-47 192.2 131 72.5
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 2.8e-47 192.2 131 74.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 2.8e-47 192.2 131 74.8
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 2.8e-47 192.2 131 74.0
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 3.7e-47 191.8 131 73.3
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 3.7e-47 191.8 131 73.3
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 3.7e-47 191.8 131 74.0
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 3.7e-47 191.8 131 73.3
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.8e-47 191.4 131 72.5
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 6.3e-47 191.0 131 72.5
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 6.3e-47 191.0 131 76.3
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 8.3e-47 190.7 131 74.0
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.1e-46 190.3 131 72.5
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.4e-46 189.9 131 72.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 2.4e-46 189.1 131 71.8
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 2.4e-46 189.1 131 71.8
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.4e-46 189.1 131 72.5
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.4e-46 189.1 131 74.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.4e-46 189.1 131 72.5
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 3.1e-46 188.7 131 71.8
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.1e-46 188.7 131 74.0
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.1e-46 188.7 139 72.7
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.1e-46 188.7 131 72.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 3.1e-46 188.7 131 71.8
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 4.1e-46 188.3 131 75.6
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 5.4e-46 188.0 131 74.0
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 5.4e-46 188.0 131 71.8
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 5.4e-46 188.0 131 74.8
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 7.0e-46 187.6 131 71.0
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.2e-45 186.8 131 70.2
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.6e-45 186.4 131 73.3
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.6e-45 186.4 131 70.2
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-45 186.4 131 70.2
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.6e-45 186.4 131 70.2
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.6e-45 186.4 131 70.2
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.6e-45 186.4 131 71.0
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.0e-45 186.0 131 71.0
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.0e-45 186.0 131 71.0
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 2.7e-45 185.7 131 71.8
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.5e-45 185.3 131 71.0
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 3.5e-45 185.3 131 72.5
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 69.5
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 70.2
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 70.2
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 72.5
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 71.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 4.5e-45 184.9 131 72.5
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.9e-45 184.5 131 69.5
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 7.7e-45 184.1 131 71.8
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 7.7e-45 184.1 131 72.5
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 7.7e-45 184.1 131 72.5
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.0e-44 183.7 131 71.0
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.3e-44 183.3 131 71.8
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.3e-44 183.3 131 71.0
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.3e-44 183.3 131 71.0
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.7e-44 183.0 131 71.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.7e-44 183.0 131 70.2
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.7e-44 183.0 131 69.5
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.7e-44 183.0 131 71.0
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.7e-44 183.0 131 69.5
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.3e-44 182.6 131 69.5
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.3e-44 182.6 131 69.5
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 2.3e-44 182.6 131 67.9
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 2.3e-44 182.6 131 68.7
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 2.9e-44 182.2 132 68.2
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 3.8e-44 181.8 131 71.8
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.8e-44 181.8 131 71.0
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.8e-44 181.8 131 71.0
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.8e-44 181.8 131 69.5
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 3.8e-44 181.8 131 71.0
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.5e-44 181.0 132 67.4
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.5e-44 181.0 132 68.2
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 8.6e-44 180.6 131 68.7
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 1.1e-43 180.3 131 69.5
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.1e-43 180.3 131 68.7
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.5e-43 179.9 131 70.2
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 2.5e-43 179.1 161 62.1
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 3.3e-43 178.7 131 70.2
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 3.3e-43 178.7 131 69.5
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 4.2e-43 178.3 131 69.5
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.2e-42 176.8 131 68.7
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.6e-42 176.4 131 68.7
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.6e-42 176.4 131 67.9
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 6.1e-42 174.5 131 66.4
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.0e-41 173.7 131 67.9
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.2e-40 170.2 131 64.9
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 1.4e-38 163.3 119 68.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.0e-36 157.1 131 61.8
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 2.3e-36 156.0 131 62.6
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 2.3e-36 156.0 131 61.8
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.5e-35 153.3 131 59.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.5e-35 152.5 131 64.9
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 3.3e-35 152.1 111 69.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 4.0e-33 145.2 131 57.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.0e-28 130.6 111 60.4
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.3e-28 129.4 131 56.5
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.5e-27 124.0 112 55.4
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.5e-24 116.7 178 42.1
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.0e-24 116.3 106 57.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 9.2e-22 107.5 135 45.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.7e-21 105.9 133 46.6
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.3e-20 103.6 137 43.1
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 3.0e-12 75.9 59 66.1


User provided reference genes

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