Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 4.0e-201 704.5 352 100.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.8e-140 503.1 310 81.0
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 4.6e-136 488.4 321 75.4
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 2.8e-133 479.2 311 74.3
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.9e-129 466.5 320 72.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.3e-127 459.5 317 71.6
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.1e-126 457.2 320 70.3
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.9e-126 456.4 320 69.7
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 3.3e-126 455.7 320 70.6
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 7.3e-126 454.5 325 68.6
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 7.3e-126 454.5 326 69.0
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 9.5e-126 454.1 320 70.0
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.1e-125 453.0 323 70.3
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 2.8e-125 452.6 320 70.6
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 2.8e-125 452.6 321 70.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 4.7e-125 451.8 320 70.9
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 6.2e-125 451.4 327 68.5
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 8.1e-125 451.1 322 68.9
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-124 450.7 327 68.5
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.1e-124 450.7 318 70.1
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.3e-124 449.5 320 69.4
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 2.3e-124 449.5 324 68.8
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 3.1e-124 449.1 320 70.3
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 3.1e-124 449.1 315 70.5
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 6.8e-124 448.0 320 69.7
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 8.9e-124 447.6 320 69.7
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.2e-123 447.2 320 69.4
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.3e-122 443.7 327 67.6
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.7e-122 443.4 320 68.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 6.4e-122 441.4 326 68.1
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 6.4e-122 441.4 320 68.1
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 8.4e-122 441.0 320 67.8
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.1e-121 440.7 328 67.4
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.4e-121 440.3 320 69.1
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 3.2e-121 439.1 318 68.6
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 4.1e-121 438.7 328 66.5
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 4.1e-121 438.7 328 65.2
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 5.4e-121 438.3 328 66.2
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 5.4e-121 438.3 322 66.5
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 9.2e-121 437.6 328 66.8
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.1e-120 436.4 318 67.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 2.7e-120 436.0 328 65.5
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 7.8e-120 434.5 307 69.4
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.9e-119 432.2 319 68.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 8.6e-119 431.0 330 65.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.1e-118 430.6 331 65.6
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.9e-118 429.9 322 66.1
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.5e-118 429.5 340 63.8
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.3e-118 428.7 330 65.5
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 5.6e-118 428.3 293 72.7
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 7.3e-118 427.9 318 66.7
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 7.3e-118 427.9 320 66.6
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.6e-117 426.8 319 67.4
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 2.1e-117 426.4 318 66.7
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.1e-117 426.4 326 65.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.8e-117 426.0 320 65.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.8e-117 426.0 320 65.9
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 3.6e-117 425.6 322 65.8
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.1e-116 424.1 318 66.0
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.4e-116 423.7 321 66.4
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.8e-116 423.3 320 65.3
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.8e-116 423.3 318 65.7
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.4e-116 422.9 318 65.7
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 5.2e-116 421.8 319 65.5
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 6.8e-116 421.4 318 65.4
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 6.8e-116 421.4 320 64.7
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.2e-115 420.6 318 65.4
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.5e-115 420.2 318 64.8
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.5e-115 420.2 323 65.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 2.0e-115 419.9 319 66.1
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 4.4e-115 418.7 318 64.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 7.6e-115 417.9 326 63.8
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 7.6e-115 417.9 319 65.2
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 1.3e-114 417.2 312 65.1
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 2.2e-114 416.4 318 64.8
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 2.9e-114 416.0 318 65.4
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.9e-114 416.0 320 64.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 3.8e-114 415.6 318 65.4
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 3.8e-114 415.6 318 65.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.8e-114 415.6 310 68.1
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 8.4e-114 414.5 319 64.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 2.4e-113 412.9 321 63.2
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.2e-113 412.5 310 67.7
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 5.4e-113 411.8 319 63.3
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.1e-113 411.4 309 65.7
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.0e-111 406.0 320 63.1
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.1e-109 399.8 303 65.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 2.8e-109 399.4 315 61.9
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 4.8e-109 398.7 326 61.7
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 6.2e-109 398.3 317 63.1
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 4.9e-106 388.7 318 59.4
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.9e-106 388.7 316 63.9
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 3.2e-105 386.0 315 61.9
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-104 382.1 300 65.7
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.3e-103 380.6 308 60.4
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.7e-103 377.9 300 65.7
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.0e-100 367.9 297 64.3
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 3.5e-96 355.9 312 58.7
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 3.0e-95 352.8 313 55.3
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 3.3e-94 349.4 319 55.2
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 4.8e-93 345.5 303 58.7
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.1e-92 344.4 312 56.1
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.7e-90 337.0 258 65.5
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.2e-90 336.7 280 62.1
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 6.0e-88 328.6 282 61.7
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.7e-82 310.5 287 55.1
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.3e-79 300.1 271 59.4
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.1e-78 297.7 214 68.7
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-78 297.4 257 61.9
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.9e-78 297.0 211 67.3
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 3.9e-71 272.7 281 53.0
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-68 263.5 306 51.3
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.8e-53 213.4 289 44.3
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 7.5e-46 188.7 105 91.4
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 4.4e-38 162.9 193 47.7
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 7.7e-35 152.1 104 67.3
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 5.0e-34 149.4 272 34.9
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 8.6e-34 148.7 121 57.9
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.1e-28 131.7 324 31.2
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.0e-28 129.0 95 66.3
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 5.0e-26 122.9 62 90.3
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.4e-23 114.8 349 28.4
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.5e-22 111.3 116 48.3
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 7.5e-22 109.0 72 76.4
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.3e-21 105.5 95 58.9
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 7.5e-14 82.4 59 64.4


User provided reference genes

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