Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 6.2e-199 697.2 340 100.0
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 5.0e-55 219.2 418 42.8
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 2.2e-50 203.8 414 40.3
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 2.2e-47 193.7 426 39.2
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.9e-46 190.7 347 41.5
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 7.2e-46 188.7 411 36.7
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 1.0e-39 168.3 366 36.9
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 1.3e-39 167.9 371 39.4
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 1.7e-39 167.5 404 36.9
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 1.7e-39 167.5 369 41.2
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 3.8e-39 166.4 403 35.5
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 1.9e-38 164.1 414 35.7
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.9e-38 164.1 402 37.1
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 3.2e-38 163.3 295 39.7
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.2e-37 161.4 392 36.2
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 1.2e-37 161.4 307 43.3
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.1e-37 160.6 415 36.9
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.1e-37 160.6 349 38.4
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 6.1e-37 159.1 305 41.3
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 1.0e-36 158.3 404 36.9
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 1.4e-36 157.9 359 39.0
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.8e-36 157.5 389 34.7
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 2.3e-36 157.1 359 39.0
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 3.0e-36 156.8 401 37.2
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 6.8e-36 155.6 404 35.1
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 8.8e-36 155.2 390 36.4
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 1.2e-35 154.8 359 38.7
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 2.6e-35 153.7 305 40.7
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 3.4e-35 153.3 366 37.7
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 5.7e-35 152.5 409 35.5
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 7.5e-35 152.1 352 38.1
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 9.8e-35 151.8 416 34.9
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 2.2e-34 150.6 395 36.2
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 2.2e-34 150.6 416 36.3
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 2.8e-34 150.2 403 35.5
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 2.8e-34 150.2 405 36.0
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 3.7e-34 149.8 396 35.4
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 4.9e-34 149.4 402 35.3
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.4e-33 147.9 310 38.1
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 3.1e-33 146.7 361 35.7
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 4.1e-33 146.4 308 38.3
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 1.6e-32 144.4 399 34.3
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 3.5e-32 143.3 362 38.4
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 3.5e-32 143.3 379 33.5
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.5e-32 143.3 379 33.5
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.5e-32 143.3 379 33.5
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.5e-32 143.3 379 33.5
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 4.5e-32 142.9 343 36.7
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 5.9e-32 142.5 354 38.7
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 5.9e-32 142.5 399 34.6
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 7.7e-32 142.1 358 34.9
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.0e-31 141.7 379 34.0
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 1.3e-31 141.4 397 35.3
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 1.7e-31 141.0 390 35.9
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 1.7e-31 141.0 352 34.9
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 6.6e-31 139.0 333 37.2
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 8.6e-31 138.7 336 36.9
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 1.1e-30 138.3 363 34.4
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.1e-30 138.3 407 33.2
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 1.9e-30 137.5 429 33.8
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.9e-30 137.5 403 33.7
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 4.3e-30 136.3 350 36.9
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 5.6e-30 136.0 362 35.1
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 1.2e-29 134.8 356 35.4
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 1.6e-29 134.4 320 36.2
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 2.1e-29 134.0 409 33.7
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 6.1e-29 132.5 365 34.8
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 6.1e-29 132.5 368 34.8
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 8.0e-29 132.1 368 35.3
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 8.0e-29 132.1 406 33.7
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 1.0e-28 131.7 338 35.5
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 1.8e-28 131.0 384 33.9
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 3.0e-28 130.2 279 39.8
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 5.2e-28 129.4 364 32.7
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 1.2e-27 128.3 357 35.6
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 1.2e-27 128.3 319 35.7
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 2.6e-27 127.1 292 38.7
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 2.6e-27 127.1 354 35.6
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 7.5e-27 125.6 339 34.5
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 1.3e-26 124.8 415 33.5
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 2.2e-26 124.0 407 33.9
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 2.9e-26 123.6 308 35.7
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 2.9e-26 123.6 344 36.0
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 3.7e-26 123.2 346 35.3
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 6.4e-26 122.5 404 32.9
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 1.1e-25 121.7 387 33.1
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 2.4e-25 120.6 286 36.0
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 4.1e-25 119.8 339 37.5
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 2.0e-24 117.5 338 31.7
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 2.7e-24 117.1 293 36.2
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 4.6e-24 116.3 340 33.5
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 4.6e-24 116.3 326 34.7
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 3.9e-23 113.2 265 37.7
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 8.6e-23 112.1 333 34.8
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.9e-22 110.9 331 34.4
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 1.4e-20 104.8 312 31.4
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 1.8e-20 104.4 276 34.8
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 4.0e-20 103.2 333 33.3
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 5.2e-20 102.8 277 34.3
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 9.8e-19 98.6 323 31.9
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.7e-18 97.8 278 36.0
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 2.2e-18 97.4 302 32.5
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 2.2e-18 97.4 211 38.9
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 4.9e-18 96.3 336 31.8
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 1.4e-17 94.7 273 33.7
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 1.4e-17 94.7 332 31.9
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 1.4e-17 94.7 411 30.7
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 2.4e-17 94.0 263 35.4
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 3.2e-17 93.6 282 35.1
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 4.1e-17 93.2 262 34.4
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 1.2e-16 91.7 166 40.4
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 1.6e-16 91.3 267 33.7
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 2.0e-16 90.9 272 37.1
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 2.0e-16 90.9 281 33.1
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 4.6e-16 89.7 269 33.5
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 3.9e-15 86.7 86 58.1
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 6.6e-15 85.9 299 32.8
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 1.4e-12 78.2 264 33.7
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 3.1e-12 77.0 105 41.9
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 6.8e-12 75.9 339 30.7
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 1.5e-11 74.7 270 31.9
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 5.8e-11 72.8 355 28.5
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 5.4e-09 66.2 348 27.3
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 1.6e-08 64.7 103 43.7
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 6.0e-08 62.8 240 29.6
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 6.0e-08 62.8 156 34.0
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.3e-07 60.8 145 32.4
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 1.1e-06 58.5 78 42.3
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 1.5e-06 58.2 152 31.6
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 2.5e-06 57.4 195 30.8
Glyma.18G195800 Glycine max HOM05D005357 ORTHO05D006354 7.3e-06 55.8 206 32.5


User provided reference genes

Program Settings