Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 0.0e+00 1201.0 584 100.0
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 1.3e-225 786.6 577 66.0
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 3.4e-221 771.9 581 65.2
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 1.7e-220 769.6 578 64.7
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 1.1e-219 766.9 574 66.0
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 2.5e-219 765.8 594 65.7
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 7.1e-219 764.2 574 65.3
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.6e-218 763.1 579 64.9
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 2.1e-218 762.7 588 64.1
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 6.0e-218 761.1 581 65.1
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.8e-217 759.6 575 64.7
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 2.3e-217 759.2 577 65.3
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 3.9e-217 758.4 496 74.2
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 5.1e-217 758.1 577 63.6
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 1.1e-216 756.9 580 64.0
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.1e-216 756.9 577 65.3
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 7.4e-216 754.2 577 64.0
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.3e-215 753.4 580 63.6
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 2.2e-215 752.7 569 64.7
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 6.3e-215 751.1 577 64.5
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.1e-214 748.8 580 63.8
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.9e-214 747.7 580 63.8
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 6.9e-214 747.7 570 64.2
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 9.0e-214 747.3 572 63.6
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 9.0e-214 747.3 589 62.5
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 1.2e-213 746.9 573 63.7
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.5e-213 746.5 580 63.4
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.5e-213 746.5 580 63.4
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 3.4e-213 745.3 571 63.9
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 2.2e-212 742.7 571 63.0
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 6.1e-210 734.6 575 65.0
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 1.8e-209 733.0 589 61.6
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 3.0e-209 732.3 569 63.4
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 3.9e-209 731.9 579 63.2
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 5.9e-205 718.0 589 61.0
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 7.7e-205 717.6 575 61.6
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 1.9e-203 713.0 573 62.3
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 2.5e-203 712.6 568 60.9
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 2.5e-203 712.6 589 60.8
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 9.4e-203 710.7 580 61.0
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.0e-201 707.2 584 60.4
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 1.8e-201 706.4 581 59.9
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 9.7e-200 700.7 579 59.8
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.8e-198 696.4 589 58.9
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 5.3e-198 694.9 582 59.8
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 9.1e-198 694.1 570 59.5
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 1.2e-197 693.7 578 60.4
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 2.0e-197 693.0 581 59.9
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 2.6e-197 692.6 581 59.7
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 4.5e-197 691.8 596 58.2
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 4.5e-197 691.8 603 57.5
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 1.7e-196 689.9 581 58.5
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 1.7e-196 689.9 576 59.4
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 3.8e-196 688.7 572 59.6
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 6.5e-196 688.0 587 58.8
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 6.5e-196 688.0 577 59.3
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 1.1e-195 687.2 573 58.1
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 4.2e-195 685.3 574 58.7
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 1.2e-194 683.7 575 58.8
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 1.2e-194 683.7 584 58.9
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 1.2e-194 683.7 584 58.9
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 1.6e-194 683.3 568 59.7
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 2.1e-194 682.9 571 58.8
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 1.8e-193 679.9 576 59.0
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 3.9e-193 678.7 565 59.6
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 8.8e-193 677.6 583 58.5
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.0e-192 676.4 581 57.7
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 4.4e-192 675.2 588 58.3
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 6.3e-191 671.4 580 58.3
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 9.1e-190 667.5 576 58.2
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 7.7e-189 664.5 578 59.2
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 2.2e-188 662.9 476 65.3
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 1.5e-187 660.2 478 65.7
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 2.5e-187 659.4 479 64.7
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 9.4e-187 657.5 575 57.9
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 4.7e-186 655.2 534 59.7
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 2.3e-185 652.9 475 64.6
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 1.2e-184 650.6 476 64.3
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 1.5e-184 650.2 476 64.1
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 2.0e-184 649.8 476 64.1
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 3.4e-184 649.0 476 64.1
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.3e-183 647.1 480 66.2
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 1.7e-183 646.7 476 63.9
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 1.1e-182 644.0 580 56.0
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 1.8e-182 643.3 582 55.0
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 3.1e-182 642.5 571 56.4
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 2.0e-181 639.8 574 56.6
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 1.2e-178 630.6 563 55.8
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 3.0e-177 625.9 564 56.4
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 2.7e-173 612.8 580 56.9
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 7.7e-173 611.3 602 54.8
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 8.6e-172 607.8 571 53.4
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 3.6e-162 575.9 578 52.6
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 1.3e-159 567.4 419 64.4
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 3.6e-154 549.3 459 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 8.3e-151 538.1 478 54.2
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 1.1e-150 537.7 473 58.6
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 1.3e-124 451.1 505 46.9
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 8.1e-122 441.8 469 51.0
Cpa.g.sc96.43 Carica papaya HOM05D004435 ORTHO05D005103 1.5e-88 331.3 231 68.0
FAN01G0536 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-74 282.7 197 71.1
PGSC0003DMG400000235 Solanum tuberosum HOM05D004435 ORTHO05D005103 3.8e-71 273.5 181 70.7
CBR_g19326 Chara braunii HOM05D004435 ORTHO05D005103 5.5e-70 269.6 555 34.2
Actinidia20096 Actinidia chinensis HOM05D004435 ORTHO05D005103 4.5e-64 250.0 270 51.5
SEGI_18144 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 1.3e-63 248.4 276 46.7
Cpa.g.sc96.46 Carica papaya HOM05D004435 ORTHO05D005103 4.7e-61 240.0 277 47.3
ATR0028G001 Amborella trichopoda HOM05D004435 ORTHO05D005103 1.2e-59 235.3 128 89.8
Actinidia20091 Actinidia chinensis HOM05D004435 ORTHO05D005103 4.7e-53 213.4 414 38.2
Atru.chr5.691 Acer truncatum HOM05D004435 ORTHO05D005103 3.4e-43 180.6 120 69.2
SEGI_02021 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 2.2e-42 177.9 136 66.9
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 1.2e-35 155.6 217 44.2
Atru.chr5.692 Acer truncatum HOM05D004435 ORTHO05D005103 1.0e-31 142.5 102 71.6
HanXRQChr10g0310771 Helianthus annuus HOM05D004435 ORTHO05D005103 1.3e-31 142.1 115 63.5
Ca_26677_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 5.8e-27 126.7 74 79.7
MCO11G580 Micromonas commoda HOM05D004435 ORTHO05D005103 8.6e-23 112.8 548 25.0
HanXRQChr03g0082981 Helianthus annuus HOM05D004435 ORTHO05D005103 1.8e-20 105.1 117 51.3
Atru.chr5.687 Acer truncatum HOM05D002476 ORTHO05D002652 2.1e-16 91.7 57 84.2
MD07G1152500 Malus domestica HOM05D004435 ORTHO05D005103 2.0e-11 75.1 50 62.0
Cre04.g223000 Chlamydomonas reinhardtii HOM05D004435 ORTHO05D005103 2.7e-08 64.7 332 23.8
arahy.Tifrunner.gnm1.ann1.63Q0V0 Arachis hypogaea HOM05D008137 ORTHO05D005103 7.4e-06 56.6 88 44.3


User provided reference genes

Program Settings