Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 7.0e-74 280.4 131 100.0
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 4.0e-45 184.9 130 61.5
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 2.0e-44 182.6 129 62.8
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 3.8e-43 178.3 129 61.2
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 4.9e-43 177.9 130 59.2
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 6.4e-43 177.6 129 62.0
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 8.4e-43 177.2 129 61.2
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.4e-42 175.6 131 60.3
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 3.2e-42 175.3 130 58.5
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.2e-42 175.3 130 58.5
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.2e-42 175.3 130 58.5
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 3.2e-42 175.3 129 59.7
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 3.2e-42 175.3 130 59.2
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.2e-42 174.9 129 58.9
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.2e-42 174.9 129 58.9
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 4.2e-42 174.9 130 57.7
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 5.4e-42 174.5 129 61.2
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 5.4e-42 174.5 130 58.5
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 7.1e-42 174.1 129 59.7
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 7.1e-42 174.1 130 57.7
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 9.3e-42 173.7 131 60.3
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 9.3e-42 173.7 129 60.5
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.2e-41 173.3 129 61.2
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 1.2e-41 173.3 129 59.7
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 2.1e-41 172.6 130 59.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 2.7e-41 172.2 130 59.2
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.7e-41 172.2 129 60.5
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 3.5e-41 171.8 130 58.5
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 4.6e-41 171.4 130 59.2
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 6.0e-41 171.0 130 59.2
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 7.8e-41 170.6 130 58.5
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 7.8e-41 170.6 129 58.1
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.3e-40 169.9 130 57.7
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.3e-40 169.9 130 55.4
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.7e-40 169.5 129 58.9
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 2.3e-40 169.1 129 55.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 2.3e-40 169.1 129 56.6
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.0e-40 168.7 129 56.6
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 3.0e-40 168.7 129 55.0
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 3.0e-40 168.7 130 56.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 3.0e-40 168.7 129 59.7
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 3.0e-40 168.7 130 56.9
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 3.9e-40 168.3 130 55.4
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 5.1e-40 167.9 130 58.5
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 6.6e-40 167.5 130 56.2
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 6.6e-40 167.5 130 58.5
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 6.6e-40 167.5 129 54.3
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 8.7e-40 167.2 130 56.9
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 1.1e-39 166.8 131 57.3
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 1.1e-39 166.8 129 55.0
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.5e-39 166.4 129 58.1
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.5e-39 166.4 131 57.3
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 2.5e-39 165.6 130 55.4
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.3e-39 165.2 129 55.0
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 4.3e-39 164.9 130 54.6
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 4.3e-39 164.9 129 55.0
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.6e-39 164.5 130 53.1
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.6e-39 164.5 130 53.1
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 5.6e-39 164.5 130 56.9
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 7.3e-39 164.1 130 54.6
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 9.6e-39 163.7 129 53.5
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 9.6e-39 163.7 129 53.5
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 9.6e-39 163.7 129 54.3
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 1.3e-38 163.3 132 56.1
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 3.6e-38 161.8 129 57.4
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.6e-38 161.8 129 56.6
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 6.2e-38 161.0 131 57.3
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 8.1e-38 160.6 129 56.6
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 1.1e-37 160.2 130 53.8
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.4e-37 159.8 130 54.6
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.8e-37 159.5 129 55.0
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.1e-37 158.7 129 55.0
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.9e-37 157.5 129 54.3
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 6.9e-37 157.5 130 53.8
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 9.0e-37 157.1 129 52.7
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 9.0e-37 157.1 172 45.9
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.5e-36 156.4 129 55.0
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.6e-36 155.6 132 53.0
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.4e-36 155.2 132 53.0
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 3.4e-36 155.2 132 53.0
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.3e-35 153.3 129 51.2
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 3.8e-35 151.8 129 55.0
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 8.4e-35 150.6 130 54.6
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.1e-34 150.2 134 52.2
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.4e-34 149.1 128 50.8
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.6e-33 146.4 131 54.2
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.1e-33 146.0 132 52.3
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 2.7e-33 145.6 130 52.3
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.7e-33 145.6 129 51.9
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.7e-33 145.6 131 52.7
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 6.0e-33 144.4 130 53.1
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.3e-32 143.3 130 50.8
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 1.7e-32 142.9 130 52.3
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 3.0e-32 142.1 133 51.1
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 3.9e-32 141.7 136 47.1
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 6.6e-32 141.0 130 49.2
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 6.6e-32 141.0 130 49.2
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.1e-31 140.2 130 49.2
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.1e-31 140.2 130 49.2
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.1e-31 140.2 130 49.2
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 4.3e-31 138.3 130 50.8
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 2.8e-30 135.6 112 52.7
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 3.6e-30 135.2 131 46.6
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 8.1e-30 134.0 129 49.6
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 4.0e-29 131.7 102 58.8
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 6.9e-29 131.0 223 32.7
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.5e-28 129.8 131 47.3
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 6.4e-27 124.4 110 50.9
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.1e-26 123.6 129 44.2
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 3.2e-26 122.1 152 42.1
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 6.7e-24 114.4 102 48.0
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 1.1e-23 113.6 81 59.3
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.5e-23 112.5 81 61.7
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 3.3e-23 112.1 78 61.5
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 8.4e-19 97.4 109 43.1
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 7.1e-18 94.4 74 56.8
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 1.0e-16 90.5 63 61.9
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.7e-11 73.2 59 55.9
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 1.7e-11 73.2 72 51.4
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 2.5e-10 69.3 54 50.0
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 8.7e-08 60.8 132 30.3
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.5e-07 60.1 48 54.2
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.5e-07 60.1 48 54.2
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.5e-07 59.3 52 50.0
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.3e-06 57.0 48 52.1
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 2.8e-06 55.8 50 52.0


User provided reference genes

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