Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.4e-129 466.5 261 100.0
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 8.5e-79 297.7 198 74.7
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 4.6e-77 292.0 214 68.7
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.7e-75 285.0 202 72.8
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 1.3e-74 283.9 194 73.2
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 1.8e-73 280.0 193 71.5
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 2.4e-73 279.6 192 71.9
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 2.4e-73 279.6 196 70.9
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 3.1e-73 279.3 191 74.3
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 3.1e-73 279.3 178 76.4
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 4.1e-73 278.9 192 71.9
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 4.1e-73 278.9 180 75.0
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 4.1e-73 278.9 178 74.2
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 5.3e-73 278.5 177 76.3
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 6.9e-73 278.1 175 76.0
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 9.1e-73 277.7 195 70.3
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 9.1e-73 277.7 175 75.4
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 9.1e-73 277.7 175 75.4
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 1.5e-72 276.9 183 74.9
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.5e-72 276.9 199 68.8
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.5e-72 276.9 199 68.8
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 2.0e-72 276.6 196 71.4
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 2.0e-72 276.6 193 70.5
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.0e-72 276.6 179 74.3
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 2.6e-72 276.2 207 67.1
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 3.4e-72 275.8 175 75.4
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 4.5e-72 275.4 182 73.1
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 4.5e-72 275.4 202 70.3
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 5.9e-72 275.0 187 72.2
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 7.7e-72 274.6 180 74.4
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.0e-71 274.2 182 70.9
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.0e-71 274.2 191 70.7
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.0e-71 274.2 193 68.9
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.7e-71 273.5 185 71.9
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 1.7e-71 273.5 196 70.9
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.7e-71 273.5 198 69.7
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 2.2e-71 273.1 179 73.7
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 2.2e-71 273.1 198 68.7
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.9e-71 272.7 199 67.3
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 3.8e-71 272.3 179 74.3
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 5.0e-71 271.9 198 70.7
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 5.0e-71 271.9 180 72.2
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 5.0e-71 271.9 184 71.7
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 5.0e-71 271.9 179 73.2
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 8.5e-71 271.2 189 69.8
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 8.5e-71 271.2 192 70.3
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 8.5e-71 271.2 192 70.3
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.1e-70 270.8 238 60.9
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.1e-70 270.8 176 73.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.1e-70 270.8 197 68.5
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 2.5e-70 269.6 170 74.1
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.2e-70 269.2 203 65.5
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 4.2e-70 268.9 175 72.6
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 5.5e-70 268.5 193 68.9
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 5.5e-70 268.5 187 70.6
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 7.2e-70 268.1 196 68.9
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 9.4e-70 267.7 169 74.0
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.2e-69 267.3 188 70.7
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 1.6e-69 266.9 210 66.2
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 1.6e-69 266.9 207 66.2
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.1e-69 266.5 195 69.2
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.7e-69 266.2 185 70.8
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 3.6e-69 265.8 200 67.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.6e-69 265.8 186 69.9
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 4.7e-69 265.4 177 72.9
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 4.7e-69 265.4 176 73.9
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 7.9e-69 264.6 199 66.3
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 7.9e-69 264.6 199 66.3
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 7.9e-69 264.6 192 69.3
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 7.9e-69 264.6 193 68.9
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.9e-68 262.3 199 65.8
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.9e-68 262.3 199 65.8
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.9e-68 262.3 177 72.9
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 6.7e-68 261.5 192 68.8
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 8.8e-68 261.2 177 70.6
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.1e-67 260.8 201 66.7
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.5e-67 260.4 196 66.3
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.6e-67 259.6 188 68.6
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 5.7e-67 258.5 208 63.9
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.8e-66 256.1 192 66.1
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 6.3e-66 255.0 177 70.6
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 6.3e-66 255.0 177 70.6
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 8.2e-66 254.6 171 73.1
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.2e-64 250.8 177 72.9
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 1.6e-64 250.4 204 60.8
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 3.5e-64 249.2 195 63.6
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.0e-63 247.7 181 66.9
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 2.9e-63 246.1 196 63.3
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.9e-63 246.1 201 62.7
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 5.0e-63 245.4 177 66.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 3.2e-62 242.7 170 71.8
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.2e-62 242.7 183 62.8
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 3.2e-62 242.7 183 62.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.1e-61 240.0 187 64.7
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 5.2e-60 235.3 177 66.7
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 5.2e-60 235.3 171 65.5
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.3e-59 232.6 178 66.3
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.7e-58 230.3 152 71.7
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 4.8e-58 228.8 220 54.5
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 4.8e-58 228.8 220 54.5
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 6.3e-58 228.4 191 57.6
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 5.3e-57 225.3 198 57.6
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.0e-55 221.1 169 65.7
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.1e-53 213.4 197 54.8
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 2.7e-53 213.0 140 73.6
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 3.6e-53 212.6 163 69.3
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 2.2e-50 203.4 134 76.9
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.5e-48 196.1 132 72.0
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.1e-41 174.5 126 69.0
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.5e-38 164.1 120 65.0
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 8.0e-37 158.3 119 67.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.2e-32 144.4 105 69.5
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.7e-26 124.0 197 36.5
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 3.7e-26 122.9 85 72.9
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.4e-25 120.2 193 35.8
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 3.1e-20 103.2 186 37.6
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 4.1e-09 66.2 221 30.8
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 5.4e-09 65.9 164 29.9
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 9.2e-09 65.1 164 28.7
Manes.02G174300 Manihot esculenta HOM05D006773 ORTHO05D008775 2.7e-08 63.5 164 29.9
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 7.8e-08 62.0 48 58.3
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 1.0e-07 61.6 164 27.4
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 2.3e-07 60.5 219 26.5
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 7.3e-06 55.5 204 25.0


User provided reference genes

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