Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 0.0e+00 1485.3 821 100.0
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 3.1e-300 1035.0 815 68.2
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 1.3e-295 1019.6 827 67.7
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 3.0e-295 1018.5 837 66.7
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 3.1e-292 1008.4 775 69.7
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 5.2e-292 1007.7 825 68.2
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 2.6e-291 1005.4 808 68.9
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 5.8e-291 1004.2 775 69.5
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 4.9e-290 1001.1 830 65.1
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 4.1e-289 998.0 790 67.2
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 6.6e-287 990.7 834 65.1
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 8.6e-287 990.3 818 66.7
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 1.5e-286 989.6 772 68.3
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 2.8e-285 985.3 823 65.5
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 6.2e-285 984.2 807 66.3
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.1e-284 983.4 842 62.8
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 1.4e-284 983.0 765 67.8
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 1.4e-284 983.0 756 68.1
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.4e-284 983.0 807 65.8
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 2.3e-284 982.2 754 68.4
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 3.1e-284 981.9 844 64.9
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 4.0e-284 981.5 763 68.5
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 6.8e-284 980.7 820 66.3
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 6.8e-284 980.7 811 65.7
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 6.8e-284 980.7 823 64.2
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 8.9e-284 980.3 822 64.4
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.0e-283 979.2 819 65.2
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 2.0e-283 979.2 840 66.2
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.6e-283 978.8 836 65.7
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 5.8e-283 977.6 819 65.1
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.2e-282 975.7 757 70.4
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 2.2e-282 975.7 758 67.8
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 2.2e-282 975.7 819 65.2
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 2.9e-282 975.3 823 65.9
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 3.7e-282 974.9 841 64.6
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 6.4e-282 974.2 848 61.9
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 8.3e-282 973.8 758 70.1
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 8.3e-282 973.8 819 64.8
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 8.3e-282 973.8 819 65.0
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 1.9e-281 972.6 833 65.4
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 3.2e-281 971.8 827 64.8
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 4.1e-281 971.5 816 63.5
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 7.1e-281 970.7 767 69.1
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 9.2e-281 970.3 819 64.7
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 9.2e-281 970.3 826 63.9
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.1e-280 969.1 755 69.4
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 2.7e-280 968.8 831 64.6
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 6.0e-280 967.6 766 67.4
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 7.8e-280 967.2 762 69.2
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.3e-279 966.5 820 65.4
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 6.6e-279 964.1 767 68.8
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.5e-278 963.0 822 64.8
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.5e-278 963.0 837 64.9
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 1.5e-278 963.0 775 68.3
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 2.5e-278 962.2 757 68.4
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 7.3e-278 960.7 760 68.3
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 2.4e-276 955.7 838 64.7
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 1.3e-274 949.9 755 66.4
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 1.7e-274 949.5 818 64.7
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 2.4e-273 945.7 756 67.6
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 2.4e-273 945.7 888 60.8
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 1.6e-272 943.0 759 68.6
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 2.1e-272 942.6 823 63.4
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 2.1e-272 942.6 789 64.5
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 1.7e-271 939.5 819 64.8
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 6.6e-271 937.6 823 63.7
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 6.6e-271 937.6 840 64.9
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 1.9e-270 936.0 825 62.9
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 8.1e-269 930.6 825 63.0
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 1.1e-268 930.2 826 61.7
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 1.8e-268 929.5 815 63.8
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 2.4e-268 929.1 762 68.0
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 3.1e-268 928.7 755 66.5
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 2.0e-267 926.0 839 62.5
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 1.3e-266 923.3 926 57.3
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 2.2e-266 922.5 818 62.2
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 2.2e-266 922.5 820 62.4
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 2.9e-266 922.2 827 61.7
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 6.4e-266 921.0 820 60.7
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 9.3e-265 917.1 825 61.6
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 2.7e-264 915.6 866 62.6
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 4.6e-264 914.8 815 62.3
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 4.6e-264 914.8 815 62.3
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 7.8e-264 914.1 754 64.2
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 4.3e-262 908.3 755 63.7
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 5.6e-262 907.9 822 61.1
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 9.6e-262 907.1 903 57.0
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 1.8e-260 902.9 814 61.3
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 1.8e-260 902.9 826 59.1
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 2.4e-260 902.5 646 70.9
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 9.0e-260 900.6 834 62.7
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.5e-259 899.8 646 70.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 2.6e-259 899.0 829 60.0
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 1.3e-258 896.7 789 62.0
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 2.9e-258 895.6 789 61.9
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 1.9e-257 892.9 768 59.9
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 1.2e-256 890.2 826 59.7
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.6e-256 889.8 761 63.6
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 2.1e-256 889.4 737 68.4
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 3.5e-256 888.6 732 63.9
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 2.5e-254 882.5 810 61.5
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.4e-252 875.9 667 66.4
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.1e-249 867.1 633 71.6
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 1.4e-249 866.7 929 58.2
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 1.1e-246 857.1 667 65.2
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 1.8e-244 849.7 815 57.3
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 3.2e-241 839.0 568 74.5
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 3.0e-239 832.4 623 67.1
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 2.1e-232 809.7 762 55.6
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.8e-231 806.6 813 53.0
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 5.1e-223 778.5 765 52.7
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 6.1e-208 728.4 783 50.4
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 5.0e-202 708.8 830 53.6
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.9e-193 680.2 844 51.4
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 4.6e-179 632.5 426 75.4
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 5.6e-153 545.8 475 62.7
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.4e-143 514.6 444 63.5
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.5e-121 441.4 746 36.2
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 3.1e-119 433.7 319 69.3
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 3.1e-119 433.7 307 70.7
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 1.6e-115 421.4 772 35.8
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.4e-111 408.3 271 76.8
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.3e-93 348.6 387 52.5
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 1.2e-83 315.5 859 29.0
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.5e-68 265.4 363 52.3
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 6.8e-58 229.9 256 54.3
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.9e-53 214.2 305 45.9
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 1.3e-45 189.1 143 67.8
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 2.6e-41 174.9 125 70.4
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 1.1e-39 169.5 226 46.0
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 2.5e-36 158.3 131 59.5
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.5e-36 158.3 142 63.4
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 9.0e-34 149.8 155 52.9
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.2e-33 149.4 155 51.6
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 8.4e-32 143.3 160 52.5
unitig_748.g8066 Utricularia gibba HOM05D005394 ORTHO05D006909 1.5e-28 132.5 122 64.8
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 5.9e-09 67.4 71 56.3
Actinidia12535 Actinidia chinensis HOM05D005394 ORTHO05D055987 2.5e-07 62.0 77 45.5


User provided reference genes

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