Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 0.0e+00 1265.4 674 100.0
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 6.1e-81 306.2 687 34.5
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.0e-80 305.4 680 34.6
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 1.7e-78 298.1 630 32.2
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.7e-78 298.1 656 34.0
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 8.9e-72 275.8 710 30.0
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 1.2e-71 275.4 626 32.3
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 1.4e-69 268.5 654 31.3
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 1.9e-69 268.1 673 30.9
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.8e-65 254.2 627 31.7
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 2.8e-65 254.2 712 30.5
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 5.2e-64 250.0 680 30.6
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 8.9e-64 249.2 675 30.4
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 4.4e-63 246.9 629 30.8
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 7.6e-63 246.1 679 30.2
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 2.9e-62 244.2 684 30.1
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 1.9e-61 241.5 714 29.7
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 2.4e-61 241.1 744 29.6
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 5.4e-61 240.0 737 30.5
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 7.1e-61 239.6 744 29.4
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 9.2e-61 239.2 744 29.4
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.5e-60 237.3 654 30.7
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 6.0e-60 236.5 725 29.1
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 1.0e-59 235.7 662 30.8
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 1.0e-59 235.7 698 29.7
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 1.3e-59 235.3 655 29.6
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 1.7e-59 235.0 645 30.9
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 3.9e-59 233.8 680 31.0
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 8.6e-59 232.6 768 29.9
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 1.5e-58 231.9 621 31.4
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 5.6e-58 229.9 741 27.9
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 7.3e-58 229.6 763 29.1
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 1.2e-57 228.8 689 29.6
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 2.1e-57 228.0 753 27.9
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 2.8e-57 227.6 736 29.6
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 1.4e-56 225.3 784 28.3
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 1.4e-56 225.3 747 27.8
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 3.1e-56 224.2 765 28.9
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 4.0e-56 223.8 748 28.6
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 4.0e-56 223.8 738 28.6
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 4.0e-56 223.8 778 28.9
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 5.2e-56 223.4 703 29.2
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 1.2e-55 222.2 714 29.4
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 2.6e-55 221.1 749 28.4
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 2.6e-55 221.1 767 27.8
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 5.8e-55 219.9 776 28.7
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 7.6e-55 219.5 695 28.8
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 1.3e-54 218.8 694 28.4
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 1.7e-54 218.4 647 31.2
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 2.2e-54 218.0 730 28.4
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 6.4e-54 216.5 800 29.1
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 8.4e-54 216.1 843 28.0
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 2.4e-53 214.5 711 28.8
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 3.2e-53 214.2 673 27.5
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.2e-53 214.2 556 31.1
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 3.2e-53 214.2 672 30.2
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 5.4e-53 213.4 728 27.7
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 9.3e-53 212.6 755 28.5
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 9.3e-53 212.6 708 27.8
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 9.3e-53 212.6 650 29.4
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 9.3e-53 212.6 664 27.6
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 3.5e-52 210.7 837 27.8
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 4.6e-52 210.3 750 27.7
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 7.8e-52 209.5 827 27.1
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 1.3e-51 208.8 820 27.1
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 3.0e-51 207.6 660 28.8
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 3.9e-51 207.2 745 27.8
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 3.9e-51 207.2 842 25.8
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 5.1e-51 206.8 711 27.8
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 8.7e-51 206.1 789 27.4
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 8.7e-51 206.1 689 29.3
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 3.3e-50 204.1 672 28.7
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 3.3e-50 204.1 672 28.7
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 4.3e-50 203.8 672 28.7
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 4.3e-50 203.8 729 29.9
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 5.6e-50 203.4 782 25.4
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 7.3e-50 203.0 815 25.2
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 1.3e-49 202.2 750 28.9
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 1.3e-49 202.2 730 28.9
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 3.6e-49 200.7 661 28.0
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 3.6e-49 200.7 735 27.3
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 6.2e-49 199.9 682 28.3
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 8.1e-49 199.5 722 29.8
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 3.1e-48 197.6 796 28.3
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 5.3e-48 196.8 671 27.9
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 5.3e-48 196.8 672 28.1
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 6.9e-48 196.4 743 27.1
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 9.0e-48 196.1 669 26.3
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 9.0e-48 196.1 752 27.4
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 3.4e-47 194.1 628 28.8
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 3.4e-47 194.1 766 26.8
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 7.6e-47 193.0 720 27.8
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 9.9e-47 192.6 591 28.3
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 9.9e-47 192.6 705 27.8
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 3.8e-46 190.7 799 26.7
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 1.9e-45 188.3 664 27.4
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 5.4e-45 186.8 630 27.5
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 9.3e-45 186.0 815 27.0
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.2e-44 185.7 814 26.8
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 7.8e-44 183.0 764 26.7
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.3e-43 182.2 736 24.6
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.3e-43 182.2 714 25.4
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 3.0e-43 181.0 866 24.5
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 6.6e-43 179.9 649 26.2
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.5e-42 178.7 836 23.7
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 9.6e-42 176.0 839 25.7
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.8e-41 174.5 586 28.2
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 3.6e-41 174.1 653 27.3
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 4.8e-41 173.7 824 25.2
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 2.4e-40 171.4 676 26.6
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 2.7e-36 157.9 692 25.9
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 3.5e-36 157.5 210 44.3
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 6.0e-36 156.8 210 41.9
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 1.3e-35 155.6 508 29.1
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 2.3e-35 154.8 897 23.3
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 6.0e-28 130.2 180 40.6
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 2.3e-27 128.3 668 23.1
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 4.3e-26 124.0 172 40.7
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 4.3e-26 124.0 207 37.2
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 9.6e-26 122.9 252 35.3
CsaV3_3G019350 Cucumis sativus L. HOM05D005245 ORTHO05D006388 1.1e-24 119.4 203 37.9
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 1.3e-22 112.5 154 42.9
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 2.1e-20 105.1 175 38.3
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 2.7e-20 104.8 199 33.2
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 2.7e-20 104.8 274 34.3
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 4.6e-20 104.0 279 33.0
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 3.9e-19 100.9 268 32.8
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 8.7e-19 99.8 241 33.2
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 1.5e-18 99.0 151 35.8
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 6.3e-17 93.6 264 29.9
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 1.9e-13 82.0 126 37.3
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 7.2e-13 80.1 211 30.8
Atru.chr3.860 Acer truncatum HOM05D005245 ORTHO05D006388 1.8e-11 75.5 191 31.4
unitig_62.g23335 Utricularia gibba HOM05D005245 ORTHO05D006388 1.1e-10 72.8 121 35.5
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 4.8e-09 67.4 350 23.7
RcHm_v2.0_Chr4g0423021 Rosa chinensis HOM05D005245 ORTHO05D006388 1.3e-06 59.3 67 47.8


User provided reference genes

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