Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 0.0e+00 1284.2 666 100.0
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 7.0e-154 548.5 627 49.9
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.7e-147 527.3 632 47.5
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 4.9e-147 525.8 594 47.6
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 2.4e-146 523.5 625 48.0
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 3.2e-146 523.1 594 47.5
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.2e-145 521.2 583 49.9
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.3e-144 517.7 649 45.1
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 3.9e-144 516.2 595 48.4
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 5.0e-144 515.8 580 48.1
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 6.6e-144 515.4 592 46.1
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.3e-143 513.1 594 46.8
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.1e-142 510.4 596 46.6
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 2.8e-142 510.0 595 47.7
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.1e-141 508.1 648 44.3
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 1.8e-141 507.3 593 46.7
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 2.3e-141 506.9 665 43.8
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.3e-141 506.9 654 44.3
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 3.1e-141 506.5 594 46.6
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.9e-138 497.3 621 44.3
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 4.1e-138 496.1 653 44.1
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.6e-137 494.2 606 45.7
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.3e-136 491.1 611 45.2
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 6.2e-134 482.3 651 42.7
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 1.1e-133 481.5 602 45.3
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 8.9e-133 478.4 586 45.7
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.5e-132 477.6 648 42.9
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 9.9e-132 474.9 620 42.7
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.3e-131 474.6 602 44.7
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 2.9e-131 473.4 589 44.5
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.9e-131 472.6 597 44.1
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 4.9e-131 472.6 654 43.9
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 8.4e-131 471.9 663 41.6
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.4e-130 471.1 586 44.2
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.9e-130 470.7 613 42.6
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 3.2e-130 469.9 685 40.6
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 7.1e-130 468.8 612 43.0
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.1e-129 467.2 590 43.7
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.6e-129 466.1 596 44.5
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 7.8e-129 465.3 595 43.9
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 7.8e-129 465.3 648 42.9
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.0e-128 464.9 663 41.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.3e-128 464.5 613 42.1
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.7e-128 464.2 611 42.9
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 6.6e-128 462.2 638 42.2
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 6.6e-128 462.2 639 41.9
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 1.5e-127 461.1 633 41.5
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 2.5e-127 460.3 603 43.1
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 7.3e-127 458.8 557 45.8
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 1.2e-126 458.0 658 40.1
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.6e-126 457.6 641 42.1
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 4.7e-126 456.1 592 42.6
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 8.1e-126 455.3 593 45.2
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.2e-124 451.4 612 43.0
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 2.0e-124 450.7 602 41.2
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 2.0e-124 450.7 608 43.3
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.6e-124 450.3 662 39.0
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 4.9e-123 446.0 608 41.0
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 2.4e-122 443.7 594 41.8
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 2.4e-122 443.7 638 39.8
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 3.2e-122 443.4 594 41.8
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 2.1e-121 440.7 643 40.4
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 3.5e-121 439.9 594 41.8
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 6.0e-121 439.1 594 41.2
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 6.0e-121 439.1 593 40.6
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 7.8e-121 438.7 595 42.0
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.0e-120 438.3 639 39.6
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 1.0e-120 438.3 593 40.6
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 3.9e-120 436.4 595 41.0
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 8.7e-120 435.3 594 41.6
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 7.3e-119 432.2 595 41.2
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 2.8e-118 430.3 595 41.2
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 4.8e-118 429.5 646 39.5
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 9.0e-117 425.2 640 39.5
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.9e-114 417.5 667 37.3
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 3.3e-111 406.8 519 43.4
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.4e-109 401.4 610 42.0
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.3e-107 394.8 596 38.6
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.7e-107 394.4 529 42.0
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 3.2e-106 390.2 480 45.4
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 4.3e-103 379.8 661 36.6
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.7e-102 376.7 388 52.3
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 3.1e-101 373.6 653 37.1
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 2.1e-97 360.9 442 46.4
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 1.5e-95 354.8 429 46.6
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 1.6e-94 351.3 485 41.9
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 1.4e-93 348.2 473 43.3
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 2.0e-92 344.4 583 37.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 2.9e-91 340.5 595 37.6
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 9.4e-90 335.5 415 45.5
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 6.1e-89 332.8 628 36.1
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 3.7e-86 323.6 590 36.8
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 4.8e-86 323.2 449 41.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 8.2e-86 322.4 334 50.0
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.4e-85 321.6 592 36.0
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 1.8e-85 321.2 337 49.6
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 4.1e-85 320.1 650 35.4
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 9.1e-85 318.9 449 40.8
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 2.2e-83 314.3 374 44.9
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 2.7e-81 307.4 592 35.8
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 1.6e-73 281.6 447 38.0
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 2.0e-60 238.0 599 29.0
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 8.3e-54 216.1 286 42.0
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 3.3e-42 177.6 631 25.7
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 4.7e-41 173.7 312 38.5
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 6.1e-41 173.3 246 39.0
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 2.6e-31 141.4 237 38.0
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 4.1e-29 134.0 207 36.2
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 9.2e-29 132.9 190 39.5
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 4.3e-26 124.0 178 37.6
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 5.2e-24 117.1 246 30.5
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 4.4e-23 114.0 168 37.5
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 3.9e-19 100.9 359 27.6
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 7.3e-18 96.7 141 47.5
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.2e-14 85.1 68 63.2
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 1.6e-12 79.0 93 45.2
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 7.8e-12 76.6 67 55.2
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.6e-10 70.5 70 50.0
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 9.6e-10 69.7 190 31.6
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 1.4e-08 65.9 155 35.5
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.4e-08 65.1 79 48.1
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 6.9e-08 63.5 48 60.4


User provided reference genes

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