Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G131 Amborella trichopoda HOM05D005676 ORTHO05D007375 6.9e-44 180.3 91 100.0
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 9.0e-28 126.7 73 82.2
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 3.8e-26 121.3 73 80.8
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 8.4e-26 120.2 73 79.5
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 3.2e-25 118.2 72 77.8
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 1.2e-24 116.3 74 78.4
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.6e-24 115.9 73 76.7
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 1.6e-24 115.9 73 74.0
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 2.1e-24 115.5 73 71.2
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 6.0e-24 114.0 73 72.6
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 6.0e-24 114.0 74 75.7
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 6.0e-24 114.0 72 77.8
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 7.9e-24 113.6 72 76.4
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.0e-23 113.2 74 75.7
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.0e-23 113.2 73 69.9
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.3e-23 112.8 74 74.3
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 1.3e-23 112.8 74 75.7
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 1.8e-23 112.5 73 71.2
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 1.8e-23 112.5 74 73.0
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 2.3e-23 112.1 68 77.9
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 3.0e-23 111.7 73 74.0
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 3.0e-23 111.7 73 72.6
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 3.9e-23 111.3 74 73.0
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 3.9e-23 111.3 73 75.3
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.9e-23 111.3 74 71.6
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 3.9e-23 111.3 73 74.0
MD07G1150100 Malus domestica HOM05D005676 ORTHO05D007375 5.1e-23 110.9 74 73.0
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 5.1e-23 110.9 73 75.3
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 6.7e-23 110.5 73 68.5
Cpa.g.sc96.22 Carica papaya HOM05D005676 ORTHO05D007375 6.7e-23 110.5 72 72.2
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 6.7e-23 110.5 66 78.8
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 6.7e-23 110.5 72 76.4
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 6.7e-23 110.5 66 77.3
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 8.7e-23 110.2 66 78.8
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 8.7e-23 110.2 74 70.3
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 1.1e-22 109.8 74 74.3
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 1.5e-22 109.4 74 71.6
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 1.5e-22 109.4 70 77.1
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 1.5e-22 109.4 73 67.1
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 1.5e-22 109.4 73 67.1
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 1.9e-22 109.0 74 71.6
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 1.9e-22 109.0 74 71.6
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 2.5e-22 108.6 66 78.8
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 3.3e-22 108.2 73 72.6
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 4.3e-22 107.8 66 78.8
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 4.3e-22 107.8 73 71.2
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 5.7e-22 107.5 66 77.3
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 7.4e-22 107.1 73 71.2
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 7.4e-22 107.1 68 73.5
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 9.7e-22 106.7 75 72.0
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 9.7e-22 106.7 74 67.6
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 1.3e-21 106.3 73 69.9
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.3e-21 106.3 66 77.3
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 2.2e-21 105.5 73 69.9
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.2e-21 105.5 73 69.9
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 2.2e-21 105.5 66 77.3
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 3.7e-21 104.8 73 65.8
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 3.7e-21 104.8 73 68.5
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 3.7e-21 104.8 68 72.1
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 3.7e-21 104.8 74 66.2
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 4.8e-21 104.4 73 68.5
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 4.8e-21 104.4 76 69.7
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 4.8e-21 104.4 73 64.4
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 6.3e-21 104.0 73 67.1
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 6.3e-21 104.0 73 71.2
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 1.1e-20 103.2 65 76.9
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 1.1e-20 103.2 73 65.8
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 1.1e-20 103.2 74 70.3
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 1.4e-20 102.8 65 76.9
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 1.4e-20 102.8 66 74.2
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 1.8e-20 102.4 78 64.1
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 4.1e-20 101.3 65 75.4
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 5.3e-20 100.9 73 68.5
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 5.3e-20 100.9 65 73.8
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 9.0e-20 100.1 65 73.8
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 9.0e-20 100.1 65 73.8
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 9.0e-20 100.1 66 69.7
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 2.0e-19 99.0 66 68.2
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 2.6e-19 98.6 70 64.3
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 4.5e-19 97.8 65 72.3
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 4.5e-19 97.8 65 72.3
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 4.5e-19 97.8 65 72.3
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 4.5e-19 97.8 63 69.8
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 1.7e-18 95.9 66 72.7
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 8.5e-18 93.6 66 71.2
AL5G43810 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 2.5e-17 92.0 65 69.2
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 6.3e-13 77.4 69 50.7
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 1.4e-12 76.3 70 50.0
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 3.4e-11 71.6 41 85.4
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 1.0e-10 70.1 67 44.8
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 2.2e-10 68.9 72 44.4
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 9.7e-06 53.5 66 42.4


User provided reference genes

Program Settings