Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 8.0e-70 266.9 130 100.0
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 5.3e-13 78.2 126 36.5
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 1.2e-12 77.0 126 35.7
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 1.2e-12 77.0 126 36.5
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.2e-12 77.0 127 38.6
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.2e-12 77.0 126 40.5
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 1.5e-12 76.6 126 34.9
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.6e-12 75.9 126 37.3
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.4e-12 75.5 127 37.8
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 4.4e-12 75.1 121 38.0
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 4.4e-12 75.1 121 41.3
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 5.8e-12 74.7 127 39.4
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 1.7e-11 73.2 128 37.5
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.7e-11 73.2 124 37.9
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 1.7e-11 73.2 132 42.4
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 3.8e-11 72.0 126 38.1
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 3.8e-11 72.0 129 38.8
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 8.4e-11 70.9 126 38.1
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.4e-11 70.9 129 38.0
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 1.1e-10 70.5 132 35.6
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.1e-10 70.5 131 41.2
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.4e-10 69.3 126 35.7
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 3.2e-10 68.9 122 39.3
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 4.2e-10 68.6 69 46.4
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 5.4e-10 68.2 122 40.2
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 5.4e-10 68.2 128 37.5
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 9.3e-10 67.4 132 34.1
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 1.2e-09 67.0 126 35.7
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 1.6e-09 66.6 121 36.4
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 2.7e-09 65.9 128 37.5
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 2.7e-09 65.9 121 33.9
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.7e-09 65.9 126 34.1
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 4.6e-09 65.1 125 32.0
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 6.0e-09 64.7 67 47.8
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 7.8e-09 64.3 122 35.2
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 7.8e-09 64.3 122 39.3
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 1.0e-08 63.9 78 44.9
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 1.3e-08 63.5 78 50.0
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 1.3e-08 63.5 127 33.9
Zm00001eb383160 Zea mays HOM05D021977 ORTHO05D007875 1.3e-08 63.5 129 34.9
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 1.7e-08 63.2 122 35.2
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.7e-08 63.2 122 38.5
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 2.3e-08 62.8 125 35.2
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 3.0e-08 62.4 71 45.1
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 3.9e-08 62.0 132 35.6
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 3.9e-08 62.0 66 45.5
ATR0602G273 Amborella trichopoda HOM05D026466 ORTHO05D003152 5.1e-08 61.6 98 43.9
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 5.1e-08 61.6 122 36.9
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 8.7e-08 60.8 129 35.7
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 8.7e-08 60.8 127 32.3
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 8.7e-08 60.8 121 33.9
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 1.5e-07 60.1 132 31.8
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 1.5e-07 60.1 130 30.8
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.5e-07 60.1 121 34.7
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.5e-07 60.1 121 34.7
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 1.5e-07 60.1 115 38.3
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 1.9e-07 59.7 130 36.2
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 1.9e-07 59.7 122 33.6
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.9e-07 59.7 122 33.6
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.5e-07 59.3 128 36.7
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 2.5e-07 59.3 122 33.6
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 5.6e-07 58.2 125 30.4
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 5.6e-07 58.2 71 42.3
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 7.3e-07 57.8 129 34.1
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 7.3e-07 57.8 129 34.1
PGR031G2453 Punica granatum HOM05D007590 ORTHO05D007875 7.3e-07 57.8 128 36.7
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 7.3e-07 57.8 121 35.5
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 7.3e-07 57.8 122 36.1
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 9.6e-07 57.4 67 41.8
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 9.6e-07 57.4 130 29.2
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 1.6e-06 56.6 121 32.2
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 1.6e-06 56.6 120 31.7
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 2.1e-06 56.2 130 34.6
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 2.1e-06 56.2 78 44.9
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.1e-06 56.2 123 36.6
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.1e-06 56.2 123 36.6
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 2.1e-06 56.2 123 36.6
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 2.8e-06 55.8 145 35.2
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 2.8e-06 55.8 106 34.0
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 3.6e-06 55.5 128 31.2
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 3.6e-06 55.5 67 43.3
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 3.6e-06 55.5 124 33.9
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 4.8e-06 55.1 128 33.6
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 4.8e-06 55.1 123 34.1
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 4.8e-06 55.1 123 37.4
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 8.1e-06 54.3 129 34.9
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 8.1e-06 54.3 123 35.8


User provided reference genes

Program Settings