Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G060 Amborella trichopoda HOM05D006994 ORTHO05D008229 0.0e+00 1900.2 932 100.0
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 2.7e-58 231.5 1013 27.1
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 2.7e-50 204.9 1045 27.7
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.5e-45 189.1 1073 27.1
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 6.4e-44 183.7 1039 25.7
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 1.0e-41 176.4 1034 25.1
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 4.3e-40 171.0 1025 25.3
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 3.1e-38 164.9 962 26.4
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 3.6e-31 141.4 1023 25.0
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 1.1e-30 139.8 1035 23.8
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 2.0e-29 135.6 950 23.5
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 1.3e-28 132.9 967 25.3
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 3.7e-28 131.3 1031 22.7
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 6.4e-28 130.6 659 26.9
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 2.7e-26 125.2 741 26.2
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 1.1e-24 119.8 918 24.9
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 4.3e-24 117.9 605 26.1
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 5.6e-24 117.5 1072 23.6
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 1.6e-23 115.9 1058 24.5
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 1.6e-23 115.9 624 25.8
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 3.6e-23 114.8 1074 22.7
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 8.1e-23 113.6 984 24.2
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 8.1e-23 113.6 1028 23.3
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 1.1e-22 113.2 1008 23.5
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.4e-22 112.8 539 25.2
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 1.4e-22 112.8 676 24.9
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 1.5e-21 109.4 1041 23.2
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 2.6e-21 108.6 663 24.0
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.3e-20 106.3 1018 24.1
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 1.4e-19 102.8 665 24.7
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.9e-19 102.4 1046 24.2
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 4.2e-19 101.3 1023 24.0
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 9.3e-19 100.1 972 22.4
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 3.5e-18 98.2 1052 23.0
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 7.8e-18 97.1 1052 23.6
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 2.3e-17 95.5 1018 23.9
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 3.9e-17 94.7 1039 22.8
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 5.1e-17 94.4 1048 23.2
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 8.7e-17 93.6 1017 23.0
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 7.3e-16 90.5 983 21.8
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.3e-15 89.7 1048 23.2
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 2.1e-15 89.0 652 23.5
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 1.8e-14 85.9 1048 23.7
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 2.2e-12 79.0 625 26.2
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 3.8e-12 78.2 455 24.2
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 6.4e-12 77.4 696 22.1
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 1.4e-11 76.3 605 23.0
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.4e-11 76.3 948 23.4
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 2.4e-11 75.5 700 23.6
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 1.2e-10 73.2 239 30.1
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 1.1e-08 66.6 533 26.3
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 4.3e-08 64.7 532 25.9
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 5.6e-08 64.3 621 23.5
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 1.3e-07 63.2 580 23.6
Gohir.A09G006800 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.6e-07 62.8 66 47.0
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 1.8e-06 59.3 524 23.5
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.4e-06 58.9 672 23.5
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 3.1e-06 58.5 501 24.4
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 4.0e-06 58.2 58 51.7
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 9.0e-06 57.0 360 21.9


User provided reference genes

Program Settings