Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 1.4e-102 376.3 193 100.0
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.0e-60 237.3 195 65.1
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.2e-60 236.1 195 63.6
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 1.9e-59 233.0 197 64.0
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 3.6e-58 228.8 195 63.1
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 3.6e-58 228.8 195 62.6
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.8e-57 226.5 197 61.9
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 1.8e-57 226.5 200 62.0
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.8e-57 226.5 197 61.4
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 5.2e-57 224.9 197 60.4
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 5.2e-57 224.9 193 65.3
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 8.8e-57 224.2 197 60.9
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.1e-56 223.8 195 61.0
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.1e-56 223.8 197 61.4
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 1.5e-56 223.4 195 60.5
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 2.6e-56 222.6 193 62.7
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 3.3e-56 222.2 194 61.9
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 3.3e-56 222.2 196 60.7
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 4.4e-56 221.9 198 61.1
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 4.4e-56 221.9 197 60.4
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 5.7e-56 221.5 197 61.4
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 5.7e-56 221.5 195 62.1
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 7.4e-56 221.1 197 59.9
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 9.7e-56 220.7 195 61.0
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 1.7e-55 219.9 198 63.1
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 1.7e-55 219.9 194 62.4
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 1.7e-55 219.9 196 61.2
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 2.8e-55 219.2 195 59.5
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 2.8e-55 219.2 215 57.2
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 2.8e-55 219.2 195 60.5
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 3.7e-55 218.8 195 61.5
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 4.8e-55 218.4 196 59.2
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 4.8e-55 218.4 195 60.5
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 1.1e-54 217.2 194 60.8
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 1.1e-54 217.2 195 60.0
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 1.1e-54 217.2 194 60.8
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 1.4e-54 216.9 193 61.7
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 1.4e-54 216.9 190 62.6
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 1.8e-54 216.5 197 58.4
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 3.1e-54 215.7 196 58.7
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 3.1e-54 215.7 195 60.5
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 3.1e-54 215.7 195 58.5
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 3.1e-54 215.7 215 59.1
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 4.1e-54 215.3 196 59.2
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 4.1e-54 215.3 197 57.9
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.3e-54 214.9 196 58.2
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 5.3e-54 214.9 197 59.4
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 5.3e-54 214.9 197 59.4
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 7.0e-54 214.5 192 60.9
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 7.0e-54 214.5 215 55.8
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 9.1e-54 214.2 215 55.8
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 9.1e-54 214.2 192 63.0
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.2e-53 213.8 195 57.4
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 1.2e-53 213.8 196 58.2
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 1.2e-53 213.8 196 58.2
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.6e-53 213.4 196 57.7
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 1.6e-53 213.4 193 61.1
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.0e-53 213.0 196 58.2
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.0e-53 213.0 215 55.3
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 2.0e-53 213.0 200 58.0
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 2.6e-53 212.6 195 57.9
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 3.5e-53 212.2 204 58.3
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 3.5e-53 212.2 193 62.2
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 3.5e-53 212.2 193 61.1
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 3.5e-53 212.2 196 58.7
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 4.5e-53 211.8 193 60.1
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 5.9e-53 211.5 201 60.7
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 2.2e-52 209.5 195 58.5
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 2.9e-52 209.1 197 57.9
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 2.9e-52 209.1 204 57.4
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 3.8e-52 208.8 193 60.6
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 3.8e-52 208.8 195 60.0
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 3.8e-52 208.8 189 59.3
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 3.8e-52 208.8 196 60.2
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 6.5e-52 208.0 217 55.3
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 6.5e-52 208.0 202 59.9
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 1.5e-51 206.8 176 62.5
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 2.5e-51 206.1 200 58.0
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 3.2e-51 205.7 200 58.0
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 3.2e-51 205.7 203 57.6
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 3.2e-51 205.7 214 52.3
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 5.5e-51 204.9 167 65.3
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 7.2e-51 204.5 154 68.8
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 7.2e-51 204.5 161 66.5
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 1.6e-50 203.4 183 61.7
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 1.6e-50 203.4 193 58.5
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 2.7e-50 202.6 167 64.7
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 3.6e-50 202.2 206 54.9
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 3.6e-50 202.2 155 67.7
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 4.7e-50 201.8 178 60.7
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 4.7e-50 201.8 210 54.8
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 2.3e-49 199.5 215 51.6
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 1.5e-48 196.8 189 57.7
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.5e-48 196.8 178 60.1
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 4.4e-48 195.3 185 58.4
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 2.9e-44 182.6 157 63.1
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.2e-42 177.2 192 52.6
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 2.7e-42 176.0 155 60.6
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.5e-35 153.7 181 48.6
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 2.1e-34 149.8 156 51.3
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 1.8e-33 146.7 155 53.5
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 5.2e-33 145.2 195 44.1
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 6.8e-33 144.8 195 46.2
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 2.2e-31 139.8 113 64.6
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 3.2e-30 136.0 196 41.8
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 5.4e-30 135.2 162 44.4
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 1.0e-25 120.9 125 55.2
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 1.4e-25 120.6 157 48.4
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 9.8e-24 114.4 178 41.0
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.3e-23 114.0 93 60.2
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 8.1e-18 94.7 159 40.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.1e-17 92.8 119 38.7
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 4.9e-15 85.5 109 48.6
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 5.2e-09 65.5 166 31.9
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 8.4e-07 58.2 36 75.0
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 5.4e-06 55.5 70 42.9


User provided reference genes

Program Settings