Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G322 Amborella trichopoda HOM05D002007 ORTHO05D000355 9.5e-178 627.1 407 100.0
Nn4g24181 Nelumbo nucifera HOM05D002007 ORTHO05D000355 3.6e-60 236.5 456 37.1
Dinv19018 Davidia involucrata HOM05D002007 ORTHO05D000355 8.3e-57 225.3 457 33.7
Aqoxy3G00112 Aquilegia oxysepala HOM05D002007 ORTHO05D000355 1.1e-56 224.9 460 32.8
DCAR_010740 Daucus carota HOM05D002007 ORTHO05D000355 2.7e-55 220.3 457 33.0
Lj2P434T45 Lonicera japonica HOM05D002007 ORTHO05D000355 6.0e-55 219.2 461 39.5
Prupe.3G160100 Prunus persica HOM05D002007 ORTHO05D000355 3.0e-54 216.9 458 32.5
EL10Ac2g04472 Beta vulgaris HOM05D002007 ORTHO05D000355 8.6e-54 215.3 457 33.0
Dinv14885 Davidia involucrata HOM05D002007 ORTHO05D000355 1.5e-53 214.5 456 33.1
TAR371G1089 Trochodendron aralioides HOM05D002007 ORTHO05D000355 4.3e-53 213.0 457 39.2
AUR62023183 Chenopodium quinoa HOM05D002007 ORTHO05D000355 1.6e-52 211.1 456 32.5
CiPaw.03G069400 Carya illinoinensis HOM05D002007 ORTHO05D000355 3.6e-52 209.9 464 37.9
CSS0003415 Camellia sinensis var. sinensis HOM05D002007 ORTHO05D000355 3.1e-51 206.8 457 31.5
Rhsim08G0086500 Rhododendron simsii HOM05D002007 ORTHO05D000355 4.0e-51 206.5 458 31.2
Actinidia17226 Actinidia chinensis HOM05D002007 ORTHO05D000355 5.8e-50 202.6 455 38.9
AUR62023230 Chenopodium quinoa HOM05D002007 ORTHO05D000355 5.8e-50 202.6 456 32.0
Duzib133G0117 Durio zibethinus HOM05D002007 ORTHO05D000355 5.8e-50 202.6 463 30.0
Sc11g0008660 Simmondsia chinensis HOM05D002007 ORTHO05D000355 5.8e-50 202.6 457 31.7
Cpa.g.sc116.29 Carica papaya HOM05D002007 ORTHO05D000355 3.7e-49 199.9 483 30.4
Oeu047413.1 Olea europaea HOM05D002007 ORTHO05D000355 3.7e-49 199.9 457 34.6
MSTRG.2783 Avicennia marina HOM05D002007 ORTHO05D000355 1.1e-48 198.4 498 29.1
MD09G1262300 Malus domestica HOM05D002007 ORTHO05D000355 4.1e-48 196.4 471 36.9
QL11p003913 Quercus lobata HOM05D002007 ORTHO05D000355 1.6e-47 194.5 512 30.5
Actinidia26787 Actinidia chinensis HOM05D002007 ORTHO05D000355 3.5e-47 193.4 378 31.5
Migut.H00273 Erythranthe guttata HOM05D002007 ORTHO05D000355 4.6e-47 193.0 457 30.0
Eucgr.J01548 Eucalyptus grandis HOM05D002007 ORTHO05D000355 4.6e-47 193.0 457 30.4
FAN10G4320 Fragaria x ananassa HOM05D002007 ORTHO05D000355 1.7e-46 191.0 459 30.1
MBI10_g08552_MAGBIO Magnolia biondii HOM05D002007 ORTHO05D000355 2.3e-46 190.7 459 37.3
FvH4_7g03480 Fragaria vesca HOM05D002007 ORTHO05D000355 3.9e-46 189.9 460 30.9
FAN06G1835 Fragaria x ananassa HOM05D002007 ORTHO05D000355 6.6e-46 189.1 459 30.7
Hma1.2p1_0832F.1_g225550 Hydrangea macrophylla HOM05D002007 ORTHO05D000355 6.6e-46 189.1 457 37.6
SGA_v2.0_scaffold149G36498 Striga asiatica HOM05D002007 ORTHO05D000355 6.6e-46 189.1 456 29.8
Haze_14233 Corylus avellana HOM05D002007 ORTHO05D000355 8.6e-46 188.7 410 39.5
HanXRQChr14g0440351 Helianthus annuus HOM05D002007 ORTHO05D000355 8.6e-46 188.7 472 28.6
FAN03G1132 Fragaria x ananassa HOM05D002007 ORTHO05D000355 1.1e-45 188.3 460 30.7
Manes.01G116200 Manihot esculenta HOM05D002007 ORTHO05D000355 4.3e-45 186.4 468 36.1
Actinidia14730 Actinidia chinensis HOM05D002007 ORTHO05D000355 1.6e-44 184.5 473 36.8
ECA238G3809 Erigeron canadensis HOM05D002007 ORTHO05D000355 1.6e-44 184.5 463 29.6
Lalb_Chr15g0084821 Lupinus albus HOM05D002007 ORTHO05D000355 2.1e-44 184.1 470 30.0
Ah.10g038020 Amaranthus hybridus HOM05D002007 ORTHO05D000355 4.7e-44 183.0 457 30.0
Dinv37438 Davidia involucrata HOM05D002007 ORTHO05D000355 4.7e-44 183.0 483 41.8
COL.COLO4_15732 Corchorus olitorius HOM05D002007 ORTHO05D000355 8.1e-44 182.2 358 30.4
Lj8A366T22 Lonicera japonica HOM05D002007 ORTHO05D000355 1.4e-43 181.4 472 43.4
Ciclev10011615m.g Citrus clementina HOM05D002007 ORTHO05D000355 2.4e-43 180.6 457 29.5
TAR629G0442 Trochodendron aralioides HOM05D002007 ORTHO05D000355 2.4e-43 180.6 466 44.0
ClCG03G008670 Citrullus lanatus HOM05D002007 ORTHO05D000355 6.8e-43 179.1 456 28.5
Lj6g0020415 Lotus japonicus HOM05D002007 ORTHO05D000355 6.8e-43 179.1 446 30.0
Actinidia22791 Actinidia chinensis HOM05D002007 ORTHO05D000355 8.9e-43 178.7 468 32.5
Actinidia32795 Actinidia chinensis HOM05D002007 ORTHO05D000355 8.9e-43 178.7 462 41.6
Sed0014203 Sechium edule HOM05D002007 ORTHO05D000355 8.9e-43 178.7 464 29.1
Aqoxy7G00890 Aquilegia oxysepala HOM05D002007 ORTHO05D000355 1.2e-42 178.3 459 43.6
vmacro00103 Vaccinium macrocarpon HOM05D002007 ORTHO05D000355 1.2e-42 178.3 458 43.9
MELO3C022847.2 Cucumis melo HOM05D002007 ORTHO05D000355 1.5e-42 177.9 494 32.0
Rhsim11G0038200 Rhododendron simsii HOM05D002007 ORTHO05D000355 2.0e-42 177.6 437 44.2
SalBow3G3257 Salvia bowleyana HOM05D002007 ORTHO05D000355 3.4e-42 176.8 457 29.1
TWI23G0706 Tripterygium wilfordii HOM05D002007 ORTHO05D000355 3.4e-42 176.8 457 37.6
Cfa007832 Carpinus fangiana HOM05D002007 ORTHO05D000355 9.9e-42 175.3 508 33.5
CsaV3_5G024040 Cucumis sativus L. HOM05D002007 ORTHO05D000355 9.9e-42 175.3 495 28.1
PGR042G0958 Punica granatum HOM05D002007 ORTHO05D000355 2.2e-41 174.1 508 28.5
Nn1g09296 Nelumbo nucifera HOM05D002007 ORTHO05D000355 8.4e-41 172.2 466 42.7
Atru.chr1.1841 Acer truncatum HOM05D002007 ORTHO05D000355 1.1e-40 171.8 502 28.1
Glyma.18G039300 Glycine max HOM05D002007 ORTHO05D000355 1.1e-40 171.8 466 28.3
Potri.017G126600 Populus trichocarpa HOM05D002007 ORTHO05D000355 1.9e-40 171.0 458 36.0
RhsimUnG0122700 Rhododendron simsii HOM05D002007 ORTHO05D000355 5.4e-40 169.5 268 60.8
MBI04_g30806_MAGBIO Magnolia biondii HOM05D002007 ORTHO05D000355 1.2e-39 168.3 465 43.7
vmacro13661 Vaccinium macrocarpon HOM05D002007 ORTHO05D000355 1.2e-39 168.3 462 42.9
Rhsim07G0140800 Rhododendron simsii HOM05D002007 ORTHO05D000355 2.1e-39 167.5 466 41.0
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 3.5e-39 166.8 493 40.8
Sabra17G0106500 Salix brachista HOM05D002007 ORTHO05D000355 3.5e-39 166.8 458 35.4
AUR62010491 Chenopodium quinoa HOM05D002007 ORTHO05D000355 6.0e-39 166.0 455 44.0
PGR042G2021 Punica granatum HOM05D002007 ORTHO05D000355 2.3e-38 164.1 485 39.6
FAN10G3398 Fragaria x ananassa HOM05D002007 ORTHO05D000355 3.9e-38 163.3 270 36.7
Gorai.009G222100 Gossypium raimondii HOM05D002007 ORTHO05D000355 3.9e-38 163.3 268 46.3
Oeu000908.1 Olea europaea HOM05D002007 ORTHO05D000355 3.9e-38 163.3 465 35.1
Gohir.A05G212100 Gossypium hirsutum HOM05D002007 ORTHO05D000355 5.1e-38 162.9 268 35.4
Dinv09410 Davidia involucrata HOM05D002007 ORTHO05D000355 2.5e-37 160.6 489 42.3
Thecc.04G119300 Theobroma cacao HOM05D002007 ORTHO05D000355 2.5e-37 160.6 268 46.6
TWI34G1988 Tripterygium wilfordii HOM05D002007 ORTHO05D000355 2.5e-37 160.6 474 40.7
Psat4g108320 Pisum sativum HOM05D002007 ORTHO05D000355 7.3e-37 159.1 452 39.2
MSTRG.25752 Avicennia marina HOM05D002007 ORTHO05D000355 9.6e-37 158.7 460 39.1
Gohir.D05G215400 Gossypium hirsutum HOM05D002007 ORTHO05D000355 9.6e-37 158.7 268 45.5
DCAR_004538 Daucus carota HOM05D002007 ORTHO05D000355 2.1e-36 157.5 453 42.2
Eucgr.E01154 Eucalyptus grandis HOM05D002007 ORTHO05D000355 2.1e-36 157.5 476 40.3
Gohir.A04G145000 Gossypium hirsutum HOM05D002007 ORTHO05D000355 2.1e-36 157.5 465 39.8
Ca_08161_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 3.6e-36 156.8 470 27.7
Ca_17107_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 3.6e-36 156.8 470 27.7
Glyma.11G217500 Glycine max HOM05D002007 ORTHO05D000355 6.2e-36 156.0 458 27.3
Gohir.D04G189500 Gossypium hirsutum HOM05D002007 ORTHO05D000355 1.1e-35 155.2 453 38.2
Phvul.001G231300 Phaseolus vulgaris HOM05D002007 ORTHO05D000355 1.1e-35 155.2 464 27.2
Medtr3g067670 Medicago truncatula HOM05D002007 ORTHO05D000355 1.4e-35 154.8 465 28.2
Psat5g122600 Pisum sativum HOM05D002007 ORTHO05D000355 1.4e-35 154.8 477 27.0
AUR62030401 Chenopodium quinoa HOM05D002007 ORTHO05D000355 1.8e-35 154.5 455 43.3
Gorai.012G184800 Gossypium raimondii HOM05D002007 ORTHO05D000355 1.8e-35 154.5 465 38.1
QL12p003380 Quercus lobata HOM05D002007 ORTHO05D000355 1.8e-35 154.5 453 36.6
CDE01G0532 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 2.4e-35 154.1 463 41.5
ATR0568G048 Amborella trichopoda HOM05D002007 ORTHO05D000355 1.2e-34 151.8 482 30.1
Thecc.03G321100 Theobroma cacao HOM05D002007 ORTHO05D000355 2.0e-34 151.0 485 38.6
Ah.12g058370 Amaranthus hybridus HOM05D002007 ORTHO05D000355 2.6e-34 150.6 476 39.3
CDE04G2530 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 2.6e-34 150.6 476 27.3
CiPaw.12G053000 Carya illinoinensis HOM05D002007 ORTHO05D000355 3.4e-34 150.2 478 37.4
TPR.G2559 Trifolium pratense HOM05D002007 ORTHO05D000355 3.4e-34 150.2 479 27.3
Atru.chr6.2148_Atru.chr6.2149 Acer truncatum HOM05D002007 ORTHO05D000355 5.8e-34 149.4 471 25.1
Ca_22460_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 5.8e-34 149.4 491 35.2
COL.COLO4_16738 Corchorus olitorius HOM05D002007 ORTHO05D000355 1.3e-33 148.3 268 59.0
Lalb_Chr05g0229281 Lupinus albus HOM05D002007 ORTHO05D000355 1.7e-33 147.9 456 40.4
Medtr8g072150 Medicago truncatula HOM05D002007 ORTHO05D000355 1.7e-33 147.9 464 37.7
arahy.Tifrunner.gnm1.ann1.WWV1B2 Arachis hypogaea HOM05D002007 ORTHO05D005759 2.2e-33 147.5 487 31.0
Migut.A00475 Erythranthe guttata HOM05D002007 ORTHO05D000355 2.2e-33 147.5 447 37.1
Hma1.2p1_0720F.1_g208580 Hydrangea macrophylla HOM05D002007 ORTHO05D000355 2.2e-33 147.5 466 42.7
GSVIVG01030842001 Vitis vinifera HOM05D002007 ORTHO05D000355 2.9e-33 147.1 268 45.9
Lsat_1_v5_gn_6_74000 Lactuca sativa HOM05D002007 ORTHO05D000355 4.9e-33 146.4 441 38.5
Lj4g0014196 Lotus japonicus HOM05D002007 ORTHO05D000355 4.9e-33 146.4 456 24.8
arahy.Tifrunner.gnm1.ann1.D5KL38 Arachis hypogaea HOM05D002007 ORTHO05D000355 6.4e-33 146.0 487 30.8
MELO3C010533.2 Cucumis melo HOM05D002007 ORTHO05D000355 6.4e-33 146.0 457 32.2
Lsat_1_v5_gn_2_79961 Lactuca sativa HOM05D002007 ORTHO05D000355 8.4e-33 145.6 268 41.4
Glyma.16G108300 Glycine max HOM05D002007 ORTHO05D000355 1.1e-32 145.2 458 36.9
VMungo1383G1228 Vigna mungo HOM05D002007 ORTHO05D000355 1.1e-32 145.2 271 34.7
GSVIVG01036895001 Vitis vinifera HOM05D002007 ORTHO05D000355 1.9e-32 144.4 256 57.4
TPR.G25972 Trifolium pratense HOM05D002007 ORTHO05D000355 2.4e-32 144.1 476 36.8
HPP92_014382 Vanilla planifolia HOM05D002007 ORTHO05D000355 3.2e-32 143.7 267 30.7
Haze_07987 Corylus avellana HOM05D002007 ORTHO05D000355 4.2e-32 143.3 477 40.5
Potri.003G045800 Populus trichocarpa HOM05D002007 ORTHO05D000355 7.1e-32 142.5 268 60.4
Ciclev10000932m.g Citrus clementina HOM05D002007 ORTHO05D000355 9.3e-32 142.1 454 31.1
CDE03G0080 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 1.2e-31 141.7 428 29.4
CsaV3_4G014820 Cucumis sativus L. HOM05D002007 ORTHO05D000355 1.2e-31 141.7 474 31.0
SEGI_29245 Sequoiadendron giganteum HOM05D002007 ORTHO05D000355 1.2e-31 141.7 267 58.8
Sc01g0005900 Simmondsia chinensis HOM05D002007 ORTHO05D000355 1.6e-31 141.4 266 48.9
Duzib205G2071 Durio zibethinus HOM05D002007 ORTHO05D000355 6.0e-31 139.4 268 57.5
Os04g0520900 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 1.7e-30 137.9 267 30.0
Sabra03G0020500 Salix brachista HOM05D002007 ORTHO05D000355 1.7e-30 137.9 268 60.4
Hma1.2p1_0262F.1_g105270 Hydrangea macrophylla HOM05D002007 ORTHO05D000355 5.1e-30 136.3 476 38.9
Sed0026103 Sechium edule HOM05D002007 ORTHO05D000355 1.1e-29 135.2 443 41.5
Os02g0711100 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 1.5e-29 134.8 462 26.2
Cfa012662 Carpinus fangiana HOM05D002007 ORTHO05D000355 4.3e-29 133.3 489 40.3
VMungo0251G3121 Vigna mungo HOM05D002007 ORTHO05D000355 5.6e-29 132.9 457 28.2
HanXRQChr03g0082811 Helianthus annuus HOM05D002007 ORTHO05D000355 9.6e-29 132.1 461 37.7
Zm00001eb077140 Zea mays HOM05D002007 ORTHO05D000355 1.6e-28 131.3 268 29.5
Phvul.003G278000 Phaseolus vulgaris HOM05D002007 ORTHO05D000355 4.8e-28 129.8 457 29.5
FvH4_5g24890 Fragaria vesca HOM05D002007 ORTHO05D000355 1.4e-27 128.3 268 56.7
TPR.G32438 Trifolium pratense HOM05D002007 ORTHO05D000355 2.4e-27 127.5 258 32.6
ECA240G4318 Erigeron canadensis HOM05D002007 ORTHO05D000355 3.1e-27 127.1 248 53.6
Cpa.g.sc579.2 Carica papaya HOM05D002007 ORTHO05D000355 5.3e-27 126.3 452 39.6
RcHm_v2.0_Chr3g0493431 Rosa chinensis HOM05D002007 ORTHO05D000355 1.5e-26 124.8 268 31.3
RcHm_v2.0_Chr7g0215211 Rosa chinensis HOM05D002007 ORTHO05D000355 3.4e-26 123.6 268 58.6
FAN08G2967 Fragaria x ananassa HOM05D002007 ORTHO05D000355 2.2e-25 120.9 269 42.0
SGA_v2.0_scaffold89G27369 Striga asiatica HOM05D002007 ORTHO05D000355 2.2e-25 120.9 270 43.0
FAN13G2474 Fragaria x ananassa HOM05D002007 ORTHO05D000355 8.4e-25 119.0 256 56.6
MD06G1011600 Malus domestica HOM05D002007 ORTHO05D000355 1.1e-24 118.6 268 57.8
SalBow4G0822 Salvia bowleyana HOM05D002007 ORTHO05D000355 1.1e-24 118.6 428 37.4
Haze_10416 Corylus avellana HOM05D002007 ORTHO05D000355 1.6e-23 114.8 106 55.7
RcHm_v2.0_Chr3g0493421 Rosa chinensis HOM05D002007 ORTHO05D000355 6.7e-22 109.4 103 52.4
Oeu047806.1 Olea europaea HOM05D002007 ORTHO05D000355 7.4e-21 105.9 268 53.4
MD17G1257200 Malus domestica HOM05D002007 ORTHO05D000355 3.7e-20 103.6 103 51.5
ClCG11G016170 Citrullus lanatus HOM05D002007 ORTHO05D000355 8.1e-20 102.4 285 26.7
Zm00001eb252430 Zea mays HOM05D002007 ORTHO05D000355 8.1e-20 102.4 270 40.4
TPR.G16710 Trifolium pratense HOM05D002007 ORTHO05D000355 1.2e-18 98.6 248 29.4
Zm00001eb171420 Zea mays HOM05D002007 ORTHO05D000355 1.3e-17 95.1 79 53.2
Manes.17G001120 Manihot esculenta HOM05D002007 ORTHO05D000355 3.8e-17 93.6 67 61.2
Zm00001eb418830 Zea mays HOM05D002007 ORTHO05D000355 7.1e-16 89.4 69 56.5
SEGI_22469 Sequoiadendron giganteum HOM05D002007 ORTHO05D000355 1.2e-15 88.6 81 48.1
Prupe.5G014300 Prunus persica HOM05D002007 ORTHO05D000355 1.1e-13 82.0 64 56.2
TPR.G32446 Trifolium pratense HOM05D002007 ORTHO05D000355 1.1e-13 82.0 84 51.2
HanXRQChr15g0489801 Helianthus annuus HOM05D002007 ORTHO05D000355 5.7e-13 79.7 73 50.7
Sed0011706 Sechium edule HOM05D002007 ORTHO05D000355 7.4e-13 79.3 231 27.3
Haze_10405 Corylus avellana HOM05D002007 ORTHO05D000355 1.5e-10 71.6 382 29.3
Dinv09412 Davidia involucrata HOM05D002007 ORTHO05D005759 1.7e-09 68.2 146 36.3
Ah.02g128080 Amaranthus hybridus HOM05D000424 ORTHO05D000355 2.1e-07 61.2 92 35.9
HPP92_021843 Vanilla planifolia HOM05D002007 ORTHO05D000355 7.9e-07 59.3 75 41.3
Zm00001eb418820 Zea mays HOM05D002007 ORTHO05D000355 1.3e-06 58.5 85 32.9
MBI18_g10377_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D000355 3.0e-06 57.4 93 29.0
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 3.9e-06 57.0 158 28.5
AUR62039554 Chenopodium quinoa HOM05D000424 ORTHO05D000355 3.9e-06 57.0 99 31.3
Eucgr.F03831 Eucalyptus grandis HOM05D000424 ORTHO05D000355 5.1e-06 56.6 157 26.1
Os03g0761300 Oryza sativa ssp. japonica HOM05D000424 ORTHO05D000355 6.7e-06 56.2 93 30.1
Prupe.1G490700 Prunus persica HOM05D000424 ORTHO05D000355 6.7e-06 56.2 157 24.8
QL09p032800 Quercus lobata HOM05D000424 ORTHO05D000355 6.7e-06 56.2 153 28.8
QL09p032747 Quercus lobata HOM05D000424 ORTHO05D000355 8.7e-06 55.8 153 28.1


User provided reference genes

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