Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G306 Amborella trichopoda HOM05D000830 ORTHO05D002187 4.6e-74 281.2 147 100.0
ATR0910G005 Amborella trichopoda HOM05D000830 ORTHO05D002187 7.6e-61 237.3 148 86.5
Thecc.08G041200 Theobroma cacao HOM05D000830 ORTHO05D002187 3.2e-35 152.1 146 58.2
Lsat_1_v5_gn_8_31460 Lactuca sativa HOM05D000830 ORTHO05D002187 1.6e-34 149.8 149 55.0
TAR381G1577 Trochodendron aralioides HOM05D000830 ORTHO05D002187 2.7e-34 149.1 146 56.2
RcHm_v2.0_Chr6g0302531 Rosa chinensis HOM05D000830 ORTHO05D002187 4.7e-34 148.3 148 58.1
Cpa.g.sc26.23 Carica papaya HOM05D000830 ORTHO05D002187 1.0e-33 147.1 146 57.5
HanXRQChr13g0387301 Helianthus annuus HOM05D000830 ORTHO05D002187 1.4e-33 146.7 150 54.0
CDE05G2429 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 1.8e-33 146.4 146 54.8
Actinidia37924 Actinidia chinensis HOM05D000830 ORTHO05D002187 3.0e-33 145.6 146 54.1
Actinidia28599 Actinidia chinensis HOM05D000830 ORTHO05D002187 4.0e-33 145.2 146 54.1
Gorai.002G124500 Gossypium raimondii HOM05D000830 ORTHO05D002187 4.0e-33 145.2 146 54.8
COL.COLO4_26173 Corchorus olitorius HOM05D000830 ORTHO05D002187 5.2e-33 144.8 147 54.4
Gohir.A01G112400 Gossypium hirsutum HOM05D000830 ORTHO05D002187 5.2e-33 144.8 146 54.8
Cc10_g01910 Coffea canephora HOM05D000830 ORTHO05D002187 6.7e-33 144.4 147 54.4
SGA_v2.0_scaffold92G28261 Striga asiatica HOM05D000830 ORTHO05D002187 8.8e-33 144.1 146 56.2
BcaB04g19428 Brassica carinata HOM05D000830 ORTHO05D002187 1.2e-32 143.7 146 53.4
CANSAT25G1619 Cannabis sativa HOM05D000830 ORTHO05D002187 1.2e-32 143.7 148 55.4
CARHR148490 Cardamine hirsuta HOM05D000830 ORTHO05D002187 1.5e-32 143.3 146 54.1
Thhalv10004321m.g Eutrema salsugineum HOM05D000830 ORTHO05D002187 1.5e-32 143.3 146 54.1
Gohir.D01G099200 Gossypium hirsutum HOM05D000830 ORTHO05D002187 1.5e-32 143.3 146 54.1
arahy.Tifrunner.gnm1.ann1.Z477D9 Arachis hypogaea HOM05D000830 ORTHO05D002187 2.0e-32 142.9 148 54.1
Dinv39500 Davidia involucrata HOM05D000830 ORTHO05D002187 2.0e-32 142.9 146 53.4
A09p03300 Brassica napus HOM05D000830 ORTHO05D002187 2.6e-32 142.5 146 54.1
Ciclev10001297m.g Citrus clementina HOM05D000830 ORTHO05D002187 2.6e-32 142.5 146 54.1
Duzib093G0244 Durio zibethinus HOM05D000830 ORTHO05D002187 2.6e-32 142.5 146 53.4
Dinv31826 Davidia involucrata HOM05D000830 ORTHO05D002187 3.3e-32 142.1 146 52.7
BraA09t35968Z Brassica rapa HOM05D000830 ORTHO05D002187 4.4e-32 141.7 146 53.4
CAN.G1344.5 Capsicum annuum HOM05D000830 ORTHO05D002187 4.4e-32 141.7 145 53.8
DCAR_013855 Daucus carota HOM05D000830 ORTHO05D002187 4.4e-32 141.7 147 54.4
arahy.Tifrunner.gnm1.ann1.XAZ3P8 Arachis hypogaea HOM05D000830 ORTHO05D002187 5.7e-32 141.4 148 53.4
AUR62035725 Chenopodium quinoa HOM05D000830 ORTHO05D002187 7.5e-32 141.0 152 53.3
Lalb_Chr11g0061981 Lupinus albus HOM05D000830 ORTHO05D002187 7.5e-32 141.0 146 53.4
PSO675G7614 Papaver somniferum HOM05D000830 ORTHO05D002187 7.5e-32 141.0 146 53.4
PGR083G2014 Punica granatum HOM05D000830 ORTHO05D002187 9.7e-32 140.6 148 51.4
CDE05G2892 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 1.3e-31 140.2 146 53.4
Prupe.1G368400 Prunus persica HOM05D000830 ORTHO05D002187 1.3e-31 140.2 147 55.1
Sed0025337 Sechium edule HOM05D000830 ORTHO05D002187 1.3e-31 140.2 146 52.7
AL5G16400 Arabidopsis lyrata HOM05D000830 ORTHO05D002187 1.7e-31 139.8 146 53.4
EL10Ac1g02261 Beta vulgaris HOM05D000830 ORTHO05D002187 1.7e-31 139.8 149 51.0
CSS0031717 Camellia sinensis var. sinensis HOM05D000830 ORTHO05D002187 1.7e-31 139.8 147 55.1
Carub.0005s0548 Capsella rubella HOM05D000830 ORTHO05D002187 2.2e-31 139.4 146 52.7
Glyma.17G256400 Glycine max HOM05D000830 ORTHO05D002187 2.2e-31 139.4 149 53.7
vmacro04338 Vaccinium macrocarpon HOM05D000830 ORTHO05D002187 2.2e-31 139.4 148 54.7
BcaC04g23919 Brassica carinata HOM05D000830 ORTHO05D002187 2.8e-31 139.0 146 52.7
C09p03500 Brassica napus HOM05D000830 ORTHO05D002187 2.8e-31 139.0 146 52.7
BolC9t53271H Brassica oleracea HOM05D000830 ORTHO05D002187 2.8e-31 139.0 146 52.7
DCAR_017497 Daucus carota HOM05D000830 ORTHO05D002187 2.8e-31 139.0 148 52.0
Manes.18G015500 Manihot esculenta HOM05D000830 ORTHO05D002187 2.8e-31 139.0 147 53.1
Phvul.001G008400 Phaseolus vulgaris HOM05D000830 ORTHO05D002187 2.8e-31 139.0 146 52.7
Peaxi162Scf00186g00025 Petunia axillaris HOM05D000830 ORTHO05D002187 3.7e-31 138.7 147 53.7
QL02p011043 Quercus lobata HOM05D000830 ORTHO05D002187 3.7e-31 138.7 146 53.4
Rhsim07G0246000 Rhododendron simsii HOM05D000830 ORTHO05D002187 3.7e-31 138.7 148 53.4
arahy.Tifrunner.gnm1.ann1.82YAR7 Arachis hypogaea HOM05D000830 ORTHO05D002187 4.8e-31 138.3 146 52.1
ClCG10G017860 Citrullus lanatus HOM05D000830 ORTHO05D002187 4.8e-31 138.3 146 51.4
GSVIVG01009864001 Vitis vinifera HOM05D000830 ORTHO05D002187 4.8e-31 138.3 147 53.7
AT3G27230 Arabidopsis thaliana HOM05D000830 ORTHO05D002187 6.3e-31 137.9 146 52.7
Nitab4.5_0001242g0030 Nicotiana tabacum HOM05D000830 ORTHO05D002187 6.3e-31 137.9 148 54.7
PSO541G6393 Papaver somniferum HOM05D000830 ORTHO05D002187 6.3e-31 137.9 146 52.7
MD08G1015600 Malus domestica HOM05D000830 ORTHO05D002187 8.2e-31 137.5 147 51.0
VMungo0647G2256 Vigna mungo HOM05D000830 ORTHO05D002187 8.2e-31 137.5 146 52.7
Atru.chr13.325 Acer truncatum HOM05D000830 ORTHO05D002187 1.1e-30 137.1 149 52.3
Lj5g0010490 Lotus japonicus HOM05D000830 ORTHO05D002187 1.1e-30 137.1 147 51.7
Oeu027549.1 Olea europaea HOM05D000830 ORTHO05D002187 1.1e-30 137.1 146 50.7
PGSC0003DMG400016202 Solanum tuberosum HOM05D000830 ORTHO05D002187 1.1e-30 137.1 147 53.1
FAN27G0084 Fragaria x ananassa HOM05D000830 ORTHO05D002187 1.4e-30 136.7 150 54.0
Glyma.14G217600 Glycine max HOM05D000830 ORTHO05D002187 1.4e-30 136.7 148 52.7
Sp2g16360 Schrenkiella parvula HOM05D000830 ORTHO05D002187 1.4e-30 136.7 146 51.4
THA.LOC104826476 Tarenaya hassleriana HOM05D000830 ORTHO05D002187 1.4e-30 136.7 146 52.1
Psat6g004280 Pisum sativum HOM05D000830 ORTHO05D002187 1.8e-30 136.3 146 50.0
MD15G1014500 Malus domestica HOM05D000830 ORTHO05D002187 2.4e-30 136.0 147 51.7
TPR.G30288 Trifolium pratense HOM05D000830 ORTHO05D002187 2.4e-30 136.0 148 54.1
AUR62035438 Chenopodium quinoa HOM05D000830 ORTHO05D002187 3.1e-30 135.6 153 52.3
MELO3C009587.2 Cucumis melo HOM05D000830 ORTHO05D002187 3.1e-30 135.6 146 50.7
CsaV3_3G038430 Cucumis sativus L. HOM05D000830 ORTHO05D002187 3.1e-30 135.6 146 50.7
FAN20G0756 Fragaria x ananassa HOM05D000830 ORTHO05D002187 3.1e-30 135.6 149 52.3
Glyma.04G025700 Glycine max HOM05D000830 ORTHO05D002187 3.1e-30 135.6 146 53.4
Sabra05G0182900 Salix brachista HOM05D000830 ORTHO05D002187 3.1e-30 135.6 146 52.7
Aa31LG2G5260 Aethionema arabicum HOM05D000830 ORTHO05D002187 4.1e-30 135.2 146 50.7
Aqoxy6G02316 Aquilegia oxysepala HOM05D000830 ORTHO05D002187 4.1e-30 135.2 150 50.7
FAN15G1720 Fragaria x ananassa HOM05D000830 ORTHO05D002187 4.1e-30 135.2 149 53.0
Gohir.A06G005400 Gossypium hirsutum HOM05D000830 ORTHO05D002187 4.1e-30 135.2 147 51.7
MSTRG.1210 Avicennia marina HOM05D000830 ORTHO05D002187 5.3e-30 134.8 146 51.4
Nitab4.5_0005489g0040 Nicotiana tabacum HOM05D000830 ORTHO05D002187 5.3e-30 134.8 148 54.1
Medtr3g113270 Medicago truncatula HOM05D000830 ORTHO05D002187 7.0e-30 134.4 148 52.7
Oeu024519.1 Olea europaea HOM05D000830 ORTHO05D002187 7.0e-30 134.4 146 49.3
FvH4_2g38780 Fragaria vesca HOM05D000830 ORTHO05D002187 1.2e-29 133.7 149 51.7
TWI56G1197 Tripterygium wilfordii HOM05D000830 ORTHO05D002187 1.2e-29 133.7 146 48.6
Psat5g014440 Pisum sativum HOM05D000830 ORTHO05D002187 1.6e-29 133.3 148 50.0
Potri.005G236600 Populus trichocarpa HOM05D000830 ORTHO05D002187 1.6e-29 133.3 146 51.4
AT5G40830 Arabidopsis thaliana HOM05D000830 ORTHO05D002187 2.0e-29 132.9 151 50.3
Haze_22608 Corylus avellana HOM05D000830 ORTHO05D002187 2.0e-29 132.9 146 50.7
Cfa013926 Carpinus fangiana HOM05D000830 ORTHO05D002187 2.7e-29 132.5 148 52.0
unitig_26.g9844 Utricularia gibba HOM05D000830 ORTHO05D002187 2.7e-29 132.5 146 48.6
Manes.05G149900 Manihot esculenta HOM05D000830 ORTHO05D002187 3.5e-29 132.1 146 51.4
unitig_749.g13855 Utricularia gibba HOM05D000830 ORTHO05D002187 3.5e-29 132.1 146 48.6
VMungo1309G0094 Vigna mungo HOM05D000830 ORTHO05D002187 4.5e-29 131.7 145 52.4
Carub.0007s3467 Capsella rubella HOM05D000830 ORTHO05D002187 7.7e-29 131.0 146 49.3
CiPaw.08G064500 Carya illinoinensis HOM05D000830 ORTHO05D002187 1.0e-28 130.6 146 50.0
Medtr1g024005 Medicago truncatula HOM05D000830 ORTHO05D002187 1.0e-28 130.6 151 48.3
Sabra02G0020100 Salix brachista HOM05D000830 ORTHO05D002187 1.0e-28 130.6 146 50.0
Ca_13405_v3 Cicer arietinum L. HOM05D000830 ORTHO05D002187 1.3e-28 130.2 147 50.3
Migut.C00817 Erythranthe guttata HOM05D000830 ORTHO05D002187 1.3e-28 130.2 153 50.3
Lalb_Chr14g0369761 Lupinus albus HOM05D000830 ORTHO05D002187 2.2e-28 129.4 147 50.3
Phvul.009G015500 Phaseolus vulgaris HOM05D000830 ORTHO05D002187 2.2e-28 129.4 148 51.4
Oeu054710.1 Olea europaea HOM05D000830 ORTHO05D002187 1.1e-27 127.1 146 46.6
Lj1g0024149 Lotus japonicus HOM05D000830 ORTHO05D002187 1.5e-27 126.7 148 50.0
Solyc11g010580.2 Solanum lycopersicum HOM05D000830 ORTHO05D002187 1.5e-27 126.7 147 49.7
Sopen11g005380 Solanum pennellii HOM05D000830 ORTHO05D002187 1.5e-27 126.7 147 49.7
Aa31LG9G830 Aethionema arabicum HOM05D000830 ORTHO05D002187 1.9e-27 126.3 151 47.7
SHI08080 Sapria himalayana HOM05D000830 ORTHO05D002187 1.9e-27 126.3 145 46.9
AL7G48790 Arabidopsis lyrata HOM05D000830 ORTHO05D002187 2.5e-27 125.9 151 49.0
AL7G48890 Arabidopsis lyrata HOM05D000830 ORTHO05D002187 2.5e-27 125.9 151 49.0
MSTRG.24254 Avicennia marina HOM05D000830 ORTHO05D002187 5.5e-27 124.8 146 47.3
Hma1.2p1_0337F.1_g129120 Hydrangea macrophylla HOM05D000830 ORTHO05D002187 7.2e-27 124.4 147 50.3
Lj4C28T12 Lonicera japonica HOM05D000830 ORTHO05D002187 1.6e-26 123.2 146 47.3
arahy.Tifrunner.gnm1.ann1.LTXE73 Arachis hypogaea HOM05D000830 ORTHO05D002187 1.0e-25 120.6 130 51.5
CiPaw.07G152600 Carya illinoinensis HOM05D000830 ORTHO05D002187 1.0e-25 120.6 147 49.7
CDE02G4612 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 5.2e-25 118.2 146 47.9
unitig_8.g4917 Utricularia gibba HOM05D000830 ORTHO05D002187 1.5e-24 116.7 146 41.8
Eucgr.F01633 Eucalyptus grandis HOM05D000830 ORTHO05D002187 3.4e-24 115.5 148 48.0
arahy.Tifrunner.gnm1.ann1.AUB4MC Arachis hypogaea HOM05D000830 ORTHO05D002187 4.8e-23 111.7 118 50.0
Ah.00g000060 Amaranthus hybridus HOM05D000830 ORTHO05D002187 2.4e-22 109.4 149 44.3
Medtr3g071050 Medicago truncatula HOM05D000830 ORTHO05D002187 2.0e-21 106.3 120 50.0
CDE04G2018 Ceratophyllum demersum HOM05D000830 ORTHO05D002187 2.7e-21 105.9 150 43.3
Gohir.D06G001200 Gossypium hirsutum HOM05D000830 ORTHO05D002187 2.7e-21 105.9 147 45.6
Gorai.010G005600 Gossypium raimondii HOM05D000830 ORTHO05D002187 5.9e-21 104.8 147 45.6
Potri.002G024800 Populus trichocarpa HOM05D000830 ORTHO05D002187 1.1e-19 100.5 147 44.9
ATR0745G077 Amborella trichopoda HOM05D000830 ORTHO05D002187 1.5e-19 100.1 60 83.3
TAR625G1421 Trochodendron aralioides HOM05D000830 ORTHO05D002187 3.4e-16 89.0 105 53.3
Sc15g0005100 Simmondsia chinensis HOM05D000830 ORTHO05D002187 5.7e-16 88.2 146 39.7
Oeu024523.1 Olea europaea HOM05D000700 ORTHO05D000397 1.3e-12 77.0 136 35.3
ECA233G1926 Erigeron canadensis HOM05D000830 ORTHO05D002187 1.9e-11 73.2 59 55.9
ATR0751G045 Amborella trichopoda HOM05D000830 ORTHO05D002187 2.8e-10 69.3 43 81.4
CiPaw.03G109400 Carya illinoinensis HOM05D000830 ORTHO05D002187 6.1e-10 68.2 60 48.3
Actinidia03308 Actinidia chinensis HOM05D000830 ORTHO05D002187 8.9e-09 64.3 60 43.3


User provided reference genes

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