Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 6.8e-145 517.3 261 100.0
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.7e-64 248.1 255 52.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.5e-62 243.0 256 52.7
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 9.4e-62 241.1 256 52.3
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 4.7e-61 238.8 222 57.7
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 8.0e-61 238.0 246 51.2
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.5e-59 233.8 188 58.5
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 2.0e-59 233.4 219 52.1
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 2.0e-59 233.4 219 53.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 2.0e-59 233.4 219 53.0
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 4.4e-59 232.3 267 47.2
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 4.4e-59 232.3 268 47.0
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.3e-58 230.7 219 51.1
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.7e-58 230.3 220 52.3
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.7e-58 230.3 241 49.4
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.7e-58 230.3 241 49.4
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.2e-58 229.9 192 58.3
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 3.7e-58 229.2 269 47.6
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 3.7e-58 229.2 266 47.4
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.1e-57 227.6 226 49.6
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 2.4e-57 226.5 217 52.1
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 4.1e-57 225.7 219 52.1
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 5.3e-57 225.3 213 51.6
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 5.3e-57 225.3 192 54.2
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 7.0e-57 224.9 276 47.1
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 1.2e-56 224.2 259 49.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.3e-55 220.7 208 51.9
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.7e-55 220.3 250 48.4
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.2e-55 219.9 250 48.4
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 2.2e-55 219.9 227 49.3
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 2.2e-55 219.9 193 54.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 2.9e-55 219.5 193 54.4
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 5.0e-55 218.8 261 47.1
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 6.5e-55 218.4 192 54.7
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 6.5e-55 218.4 220 48.6
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 8.5e-55 218.0 191 54.5
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.1e-54 217.6 191 53.9
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.5e-54 217.2 263 48.3
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.5e-54 217.2 269 43.5
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.5e-54 217.2 250 48.4
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.9e-54 216.9 246 47.2
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 2.5e-54 216.5 193 53.9
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.5e-54 215.3 204 52.9
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 7.2e-54 214.9 193 53.4
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 7.2e-54 214.9 204 52.9
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.2e-53 214.2 217 49.8
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.1e-53 213.4 193 53.4
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 3.6e-53 212.6 264 45.8
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 3.6e-53 212.6 266 46.6
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.8e-52 210.3 211 50.2
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.8e-52 210.3 193 52.8
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.0e-52 209.5 192 52.6
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.0e-52 209.5 223 48.9
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.0e-52 209.5 223 48.9
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 5.2e-52 208.8 191 50.3
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 6.8e-52 208.4 193 52.3
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 8.8e-52 208.0 209 48.3
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.0e-51 206.8 205 49.3
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 2.0e-51 206.8 249 48.6
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 2.0e-51 206.8 229 45.9
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.4e-51 206.1 191 55.5
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.4e-51 206.1 191 55.5
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.4e-51 206.1 192 52.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 4.4e-51 205.7 261 46.7
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 7.5e-51 204.9 281 42.7
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 9.8e-51 204.5 205 50.7
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.3e-50 204.1 191 49.7
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.3e-50 204.1 200 52.0
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 2.2e-50 203.4 261 47.1
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 2.2e-50 203.4 187 51.3
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 2.8e-50 203.0 259 44.8
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.8e-50 203.0 278 46.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 6.3e-50 201.8 241 42.7
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.1e-49 201.1 259 45.2
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.1e-49 201.1 256 45.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.8e-49 200.3 265 46.8
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.8e-49 200.3 192 53.1
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 7.0e-49 198.4 266 48.1
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 7.0e-49 198.4 187 50.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.2e-48 197.6 204 48.5
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.0e-48 196.8 187 50.3
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 2.0e-48 196.8 264 43.2
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 2.7e-48 196.4 264 46.2
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 2.7e-48 196.4 191 50.3
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.7e-48 196.4 264 43.6
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 7.7e-48 194.9 203 49.8
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 7.7e-48 194.9 264 43.2
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.7e-47 193.7 261 45.6
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.5e-46 189.9 192 50.5
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 4.2e-46 189.1 263 45.6
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 4.2e-46 189.1 263 45.6
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 4.2e-46 189.1 263 45.6
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 5.5e-46 188.7 267 41.6
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.2e-45 187.6 260 43.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.2e-45 187.6 253 41.9
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 8.0e-45 184.9 267 41.2
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.0e-43 180.3 261 41.4
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.2e-42 176.8 189 45.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 2.5e-38 163.3 157 51.6
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 8.0e-37 158.3 151 52.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.0e-36 157.9 237 40.5
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 5.2e-36 155.6 204 41.7
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 6.8e-36 155.2 187 44.9
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.4e-35 152.9 142 54.2
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 6.6e-31 138.7 206 47.6
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 2.8e-29 133.3 149 47.0
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 1.2e-21 107.8 241 30.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 4.7e-21 105.9 187 31.6
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.0e-19 100.5 143 38.5
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.9e-17 94.0 192 36.5
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 3.5e-16 89.7 86 48.8
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 6.6e-15 85.5 190 32.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 6.6e-15 85.5 65 61.5
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.4e-11 73.2 63 54.0
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 8.6e-07 58.5 41 65.9


User provided reference genes

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