Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 2.6e-172 608.6 308 100.0
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 1.2e-92 344.0 290 59.0
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 1.3e-91 340.5 303 60.1
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 3.9e-91 339.0 271 61.6
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 3.3e-90 335.9 257 64.2
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 9.6e-90 334.3 271 61.6
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.3e-89 334.0 257 63.0
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 1.4e-88 330.5 258 64.0
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 1.2e-87 327.4 256 63.3
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 2.6e-87 326.2 257 61.9
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 3.4e-87 325.9 272 62.1
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 5.8e-87 325.1 259 61.4
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.0e-86 324.3 261 60.9
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 1.0e-86 324.3 262 61.8
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 1.0e-86 324.3 263 62.4
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 1.3e-86 323.9 262 60.7
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.7e-86 323.6 247 64.4
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 2.9e-86 322.8 297 57.6
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 1.4e-85 320.5 258 62.4
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 2.5e-85 319.7 253 62.1
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 3.2e-85 319.3 282 57.4
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 4.2e-85 318.9 303 56.1
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 5.5e-85 318.5 253 63.2
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 7.1e-85 318.2 264 59.5
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 9.3e-85 317.8 269 60.6
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 9.3e-85 317.8 269 60.6
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 2.1e-84 316.6 300 53.7
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 2.1e-84 316.6 257 61.9
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 2.1e-84 316.6 257 61.9
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 4.6e-84 315.5 301 54.2
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 4.6e-84 315.5 267 61.4
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 4.6e-84 315.5 271 58.7
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 6.0e-84 315.1 258 60.5
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 6.0e-84 315.1 283 57.6
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 6.0e-84 315.1 245 62.4
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 7.9e-84 314.7 295 55.3
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 7.9e-84 314.7 313 54.6
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 1.3e-83 313.9 267 59.9
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 1.8e-83 313.5 314 55.1
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 1.8e-83 313.5 263 59.7
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 2.3e-83 313.2 279 57.7
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 2.3e-83 313.2 275 62.2
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 8.7e-83 311.2 305 53.1
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 8.7e-83 311.2 241 63.5
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 2.5e-82 309.7 280 56.1
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 3.3e-82 309.3 258 60.9
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 4.3e-82 308.9 251 59.8
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 9.7e-82 307.8 269 57.6
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 9.7e-82 307.8 273 58.6
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 1.6e-81 307.0 269 58.7
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.8e-80 303.5 251 61.4
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 1.5e-79 300.4 358 46.6
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 2.0e-79 300.1 255 58.4
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 3.4e-79 299.3 249 61.0
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.0e-78 297.7 299 50.5
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 1.7e-78 297.0 297 53.9
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 1.7e-78 297.0 261 57.5
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 3.8e-78 295.8 271 59.0
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 5.0e-78 295.4 266 56.8
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 6.5e-78 295.0 258 56.6
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 6.5e-78 295.0 320 50.3
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.1e-77 294.3 235 62.6
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.1e-77 294.3 269 57.6
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 2.5e-77 293.1 259 55.6
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 4.2e-77 292.4 241 61.0
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 5.5e-77 292.0 271 55.0
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 1.2e-76 290.8 261 57.9
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 2.1e-76 290.0 256 58.6
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 2.1e-76 290.0 259 55.2
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 2.7e-76 289.7 268 55.6
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 2.7e-76 289.7 268 55.6
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 2.7e-76 289.7 267 54.3
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 7.9e-76 288.1 261 54.8
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 1.4e-75 287.3 256 57.0
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 1.8e-75 287.0 268 55.2
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 8.8e-75 284.6 288 51.0
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 1.1e-74 284.3 246 56.9
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 4.3e-74 282.3 289 52.9
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 4.8e-73 278.9 290 51.0
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 4.8e-73 278.9 290 51.0
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 6.3e-73 278.5 263 55.1
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 1.7e-70 270.4 307 48.9
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.9e-70 269.6 269 55.0
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 7.9e-68 261.5 259 52.5
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 4.4e-66 255.8 307 47.9
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 9.7e-66 254.6 261 49.4
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 2.8e-65 253.1 267 50.9
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 2.3e-59 233.4 199 59.3
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 2.0e-58 230.3 210 56.7
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 9.7e-58 228.0 270 44.4
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 8.2e-57 224.9 270 44.1
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 1.8e-56 223.8 197 54.8
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 3.5e-55 219.5 303 44.6
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 4.5e-55 219.2 182 61.5
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 4.5e-55 219.2 215 51.2
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 5.5e-53 212.2 171 59.6
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 3.6e-52 209.5 201 52.2
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 3.3e-50 203.0 244 44.3
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 1.5e-45 187.6 209 47.8
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 6.8e-43 178.7 159 55.3
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 1.1e-40 171.4 182 54.4
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 2.3e-38 163.7 134 59.7
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 3.6e-36 156.4 190 48.4
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 5.4e-32 142.5 168 45.2
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 1.4e-24 117.9 252 34.1
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 1.4e-19 101.3 279 30.5
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 5.2e-19 99.4 193 35.2
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 6.8e-11 72.4 102 38.2
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 5.8e-10 69.3 224 25.9
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 2.4e-08 63.9 257 26.5
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 4.1e-08 63.2 53 54.7
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 2.1e-07 60.8 53 54.7
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 1.0e-06 58.5 255 25.9
Actinidia06937 Actinidia chinensis HOM05D006655 ORTHO05D007986 1.3e-06 58.2 256 25.0
Zm00001eb394530 Zea mays HOM05D006655 ORTHO05D007986 1.7e-06 57.8 247 25.1
Hund21967 Selenicereus undatus HOM05D006655 ORTHO05D007986 2.3e-06 57.4 280 24.6
ECA248G0748 Erigeron canadensis HOM05D006655 ORTHO05D007986 5.1e-06 56.2 251 24.7
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 8.6e-06 55.5 255 23.1


User provided reference genes

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