Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G211 Amborella trichopoda HOM05D005134 ORTHO05D067863 1.2e-40 169.5 90 100.0
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 8.4e-18 93.6 75 65.3
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.8e-12 75.9 76 53.9
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 1.2e-11 73.2 72 56.9
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 2.6e-11 72.0 82 46.3
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 3.4e-11 71.6 74 52.7
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 5.8e-11 70.9 72 52.8
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 7.6e-11 70.5 77 48.1
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 9.9e-11 70.1 73 50.7
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.7e-10 69.3 74 51.4
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.9e-10 68.6 74 51.4
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 2.9e-10 68.6 77 49.4
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 4.9e-10 67.8 74 50.0
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 6.4e-10 67.4 74 48.6
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 8.4e-10 67.0 77 46.8
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 8.4e-10 67.0 74 50.0
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.1e-09 66.6 80 51.2
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.1e-09 66.6 80 51.2
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 1.9e-09 65.9 72 51.4
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 3.2e-09 65.1 74 50.0
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 4.2e-09 64.7 70 52.9
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 5.4e-09 64.3 74 47.3
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 9.3e-09 63.5 70 50.0
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 1.2e-08 63.2 72 48.6
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.6e-08 62.8 72 45.8
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.6e-08 62.8 70 50.0
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 1.6e-08 62.8 70 50.0
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.6e-08 62.8 72 44.4
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 2.1e-08 62.4 74 48.6
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 2.1e-08 62.4 72 45.8
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 2.1e-08 62.4 72 45.8
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 2.7e-08 62.0 70 47.1
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 2.7e-08 62.0 65 52.3
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 3.5e-08 61.6 74 50.0
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 4.6e-08 61.2 86 43.0
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 6.0e-08 60.8 85 41.2
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 7.8e-08 60.5 70 47.1
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.3e-07 59.7 70 47.1
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 1.7e-07 59.3 72 41.7
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 1.7e-07 59.3 82 40.2
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 1.7e-07 59.3 77 42.9
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.7e-07 59.3 78 42.3
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 2.3e-07 58.9 72 43.1
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.3e-07 58.9 72 43.1
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 3.0e-07 58.5 74 44.6
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 3.0e-07 58.5 74 47.3
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.9e-07 58.2 72 43.1
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 3.9e-07 58.2 70 48.6
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 3.9e-07 58.2 76 39.5
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 3.9e-07 58.2 75 45.3
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 6.6e-07 57.4 75 41.3
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 8.7e-07 57.0 74 44.6
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.1e-06 56.6 74 45.9
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.1e-06 56.6 70 47.1
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.1e-06 56.6 74 40.5
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.5e-06 56.2 72 40.3
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 1.5e-06 56.2 73 45.2
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.5e-06 56.2 72 44.4
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.9e-06 55.8 70 45.7
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.9e-06 55.8 72 40.3
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 1.9e-06 55.8 74 44.6
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 1.9e-06 55.8 72 41.7
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.9e-06 55.8 60 50.0
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 2.5e-06 55.5 72 38.9
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.5e-06 55.5 72 44.4
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 3.3e-06 55.1 72 40.3
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 3.3e-06 55.1 72 40.3
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.3e-06 55.1 72 38.9
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.3e-06 55.1 72 41.7
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 4.3e-06 54.7 88 38.6
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 5.6e-06 54.3 72 41.7
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 7.3e-06 53.9 72 43.1
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 7.3e-06 53.9 72 37.5
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 7.3e-06 53.9 77 37.7
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 9.6e-06 53.5 73 42.5
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.6e-06 53.5 72 38.9


User provided reference genes

Program Settings