Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 5.1e-204 714.1 348 100.0
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 8.2e-154 547.4 348 76.1
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.9e-151 538.9 351 73.2
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.4e-150 536.6 351 73.8
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.4e-150 536.6 352 73.3
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 9.4e-150 533.9 351 72.9
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.0e-148 530.4 349 71.6
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 3.0e-148 528.9 350 71.1
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 3.9e-148 528.5 351 71.5
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.5e-147 526.6 354 71.5
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 3.3e-147 525.4 365 69.6
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 70.0
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.2e-146 522.7 352 70.7
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 6.3e-146 521.2 355 69.6
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 6.3e-146 521.2 355 70.4
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.4e-145 520.0 352 70.7
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.8e-145 519.6 349 71.1
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 2.4e-145 519.2 352 71.0
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 3.1e-145 518.8 355 70.1
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 4.1e-145 518.5 348 70.4
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 4.1e-145 518.5 359 70.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 6.9e-145 517.7 354 70.9
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 9.1e-145 517.3 360 69.4
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 9.1e-145 517.3 348 69.5
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.5e-144 516.5 352 70.7
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.6e-144 515.8 349 70.8
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 3.4e-144 515.4 356 69.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 3.4e-144 515.4 348 70.4
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 4.5e-144 515.0 360 68.9
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 4.5e-144 515.0 348 69.5
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.5e-144 515.0 348 69.5
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 5.9e-144 514.6 355 69.0
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.0e-143 513.8 351 69.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.0e-143 513.8 342 70.5
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.0e-143 513.8 349 70.5
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.3e-143 513.5 351 69.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.7e-143 513.1 362 68.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.7e-143 513.1 358 68.7
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.7e-143 513.1 355 68.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.7e-143 513.1 349 70.8
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 2.9e-143 512.3 349 70.8
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.0e-143 511.5 348 70.4
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 8.5e-143 510.8 360 66.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 8.5e-143 510.8 349 69.6
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.1e-142 510.4 361 68.4
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.4e-142 510.0 351 69.2
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.9e-142 509.6 352 70.2
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.9e-142 509.6 355 67.9
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 69.6
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.2e-142 508.4 351 69.5
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 4.2e-142 508.4 360 68.6
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 5.5e-142 508.1 353 68.8
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 7.2e-142 507.7 353 68.6
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 7.2e-142 507.7 361 66.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 7.2e-142 507.7 351 69.2
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 7.2e-142 507.7 352 69.9
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.4e-142 507.3 351 69.2
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 9.4e-142 507.3 357 68.6
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.2e-141 506.9 361 67.3
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.2e-141 506.9 351 68.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.7e-141 505.8 353 67.1
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.0e-140 503.8 354 68.1
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.8e-140 503.1 355 68.2
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 1.8e-140 503.1 353 66.9
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.3e-140 502.7 349 68.5
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.1e-139 500.4 365 67.9
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 1.5e-139 500.0 360 66.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 1.5e-139 500.0 354 68.6
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.5e-139 500.0 353 66.3
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.6e-139 499.2 351 65.8
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 3.3e-139 498.8 348 67.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.3e-139 498.8 352 69.3
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 3.3e-139 498.8 366 65.0
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 9.7e-139 497.3 353 66.0
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.7e-138 496.5 355 66.8
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 2.8e-138 495.7 349 66.2
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.8e-137 493.0 348 66.1
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 2.4e-137 492.7 394 61.7
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 4.1e-137 491.9 356 66.9
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 9.1e-137 490.7 351 66.4
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 9.1e-137 490.7 363 65.0
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.2e-136 490.3 354 65.3
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.6e-136 489.2 352 66.8
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 1.0e-135 487.3 358 64.5
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.3e-135 486.9 360 64.4
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 3.8e-135 485.3 353 65.2
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-134 483.4 360 63.9
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.5e-134 483.4 360 63.9
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.5e-134 483.4 353 65.4
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.5e-134 483.4 353 63.7
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.9e-134 483.0 350 64.9
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.5e-134 482.6 356 64.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 3.2e-134 482.3 358 63.7
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 4.2e-134 481.9 358 65.4
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.5e-134 481.5 359 64.6
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 7.2e-134 481.1 351 65.5
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 7.2e-134 481.1 356 64.3
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.2e-133 480.3 350 65.1
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.6e-133 479.9 357 63.9
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.6e-133 479.9 354 66.7
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.6e-133 479.9 364 63.2
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.6e-133 478.8 348 64.9
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 4.7e-133 478.4 355 65.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 8.0e-133 477.6 364 62.4
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.4e-132 476.9 355 63.1
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.3e-132 476.1 353 63.2
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.1e-131 473.8 355 63.4
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.5e-131 473.4 358 63.4
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.5e-131 473.4 355 63.9
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.5e-131 473.4 361 62.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.0e-131 473.0 355 64.5
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 7.5e-131 471.1 352 63.9
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 2.8e-130 469.2 358 63.1
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.7e-130 468.8 352 63.1
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 6.3e-130 468.0 358 62.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.8e-129 466.5 359 61.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.6e-128 463.4 337 65.9
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.6e-128 463.4 352 62.5
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.7e-128 462.6 351 64.4
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 4.5e-128 461.8 361 61.2
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 7.7e-128 461.1 349 62.8
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.0e-127 460.7 348 63.5
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 8.5e-127 457.6 351 62.1
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 8.5e-127 457.6 359 61.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 2.7e-125 452.6 354 61.6
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-124 449.9 359 61.3
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 1.2e-123 447.2 351 60.4
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.5e-123 446.8 351 61.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 5.9e-120 434.9 334 62.3
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.7e-119 433.3 303 71.0
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.4e-116 423.7 285 73.0
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.0e-108 396.0 349 59.3
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.4e-105 386.3 295 63.7
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.1e-101 373.2 350 54.3
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.0e-97 358.2 271 65.3
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.3e-95 354.0 327 55.4
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.1e-92 344.4 291 57.0
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 3.3e-78 296.2 353 42.8
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.2e-72 277.7 275 53.1
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.9e-71 272.7 213 64.8
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.9e-71 272.7 351 43.9
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-65 254.2 242 57.0
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 1.0e-63 248.1 356 36.2
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.6e-63 245.4 156 70.5
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 9.6e-54 214.9 115 85.2
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.8e-53 213.4 175 62.3
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.6e-51 205.3 129 72.1
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.8e-50 203.0 124 75.8
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 8.2e-37 158.7 164 53.0
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-30 137.9 85 69.4
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 5.7e-30 136.0 138 50.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-29 134.4 85 68.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.7e-29 133.3 85 67.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.0e-27 127.5 85 64.7
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.7e-27 125.6 106 57.5
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.2e-26 124.0 182 40.1
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 1.9e-25 120.9 133 50.4
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 3.0e-23 113.6 64 79.7
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 5.2e-23 112.8 59 84.7
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 5.2e-23 112.8 59 84.7
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 5.7e-22 109.4 184 40.8
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.7e-21 106.7 58 81.0
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 9.1e-20 102.1 56 83.9
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.6e-19 101.3 148 38.5
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.2e-18 97.4 55 81.8
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.5e-17 94.0 76 60.5
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.6e-16 90.1 75 56.0
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.7e-14 82.0 59 62.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.3e-13 81.6 149 32.2
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.7e-13 81.3 58 60.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.8e-13 79.7 188 30.9
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 7.0e-12 75.9 75 48.0
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-11 74.7 37 78.4
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 5.0e-10 69.7 64 50.0
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.2e-09 67.0 50 60.0
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.7e-08 63.9 82 41.5
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 3.6e-08 63.5 56 51.8
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 1.4e-07 61.6 174 27.0
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 8.8e-07 58.9 158 25.3
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 4.4e-06 56.6 87 35.6
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 9.8e-06 55.5 126 35.7


User provided reference genes

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