Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 7.7e-157 557.4 337 100.0
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 1.8e-28 131.0 315 34.9
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.3e-26 124.8 322 35.7
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 2.8e-26 123.6 322 35.1
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 6.3e-26 122.5 265 39.6
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 1.4e-25 121.3 268 36.6
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 4.1e-25 119.8 203 43.8
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 9.1e-25 118.6 303 34.3
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 4.5e-24 116.3 280 38.6
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 4.5e-24 116.3 280 38.6
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 5.9e-24 115.9 285 35.4
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 1.7e-23 114.4 307 34.2
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 2.2e-23 114.0 272 39.0
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 5.0e-23 112.8 265 37.0
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 1.5e-22 111.3 126 49.2
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 1.9e-22 110.9 248 37.1
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 1.9e-22 110.9 307 31.9
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 1.2e-21 108.2 168 43.5
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 1.2e-21 108.2 297 33.0
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 1.6e-21 107.8 286 34.6
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.7e-21 106.3 229 36.7
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 6.1e-21 105.9 231 36.4
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 8.0e-21 105.5 271 33.6
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 5.2e-20 102.8 232 37.5
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 5.2e-20 102.8 269 33.8
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 8.8e-20 102.1 303 33.7
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 8.8e-20 102.1 173 36.4
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 8.8e-20 102.1 271 34.7
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.1e-19 101.7 167 40.7
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.5e-19 101.3 341 33.4
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 1.5e-19 101.3 246 33.7
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.0e-19 100.9 139 46.0
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 2.0e-19 100.9 165 37.0
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 2.6e-19 100.5 146 45.9
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 2.6e-19 100.5 184 40.8
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 2.6e-19 100.5 276 33.3
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 3.3e-19 100.1 185 41.6
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 3.3e-19 100.1 194 39.2
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 3.3e-19 100.1 305 31.5
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 4.4e-19 99.8 287 31.7
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 5.7e-19 99.4 242 36.0
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 7.5e-19 99.0 287 33.4
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 7.5e-19 99.0 289 31.8
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 9.7e-19 98.6 165 41.8
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 1.3e-18 98.2 266 35.0
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 1.7e-18 97.8 285 33.7
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 2.2e-18 97.4 276 34.1
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 3.7e-18 96.7 331 31.7
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 3.7e-18 96.7 279 32.6
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 3.7e-18 96.7 124 50.8
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 6.3e-18 95.9 310 32.3
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 8.2e-18 95.5 288 34.0
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 1.1e-17 95.1 294 32.0
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 1.1e-17 95.1 204 38.2
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 1.1e-17 95.1 292 33.6
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 1.4e-17 94.7 208 35.6
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 1.8e-17 94.4 134 47.0
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 1.8e-17 94.4 281 32.4
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 2.4e-17 94.0 243 35.8
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 2.4e-17 94.0 292 34.9
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 3.1e-17 93.6 165 40.6
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 3.1e-17 93.6 132 48.5
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 4.1e-17 93.2 145 37.9
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 7.0e-17 92.4 148 45.9
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 7.0e-17 92.4 153 40.5
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 9.1e-17 92.0 153 42.5
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 9.1e-17 92.0 153 42.5
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 9.1e-17 92.0 167 42.5
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 1.2e-16 91.7 185 36.8
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 1.6e-16 91.3 134 45.5
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 2.7e-16 90.5 280 33.2
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 3.5e-16 90.1 243 36.6
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 3.5e-16 90.1 280 33.2
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.0e-15 88.6 221 35.7
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 1.0e-15 88.6 214 38.8
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 1.3e-15 88.2 257 33.9
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 1.7e-15 87.8 148 41.9
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 2.9e-15 87.0 273 32.2
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 5.0e-15 86.3 197 35.0
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 6.5e-15 85.9 278 32.4
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 6.5e-15 85.9 336 30.1
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 8.5e-15 85.5 278 32.4
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 1.9e-14 84.3 139 44.6
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 2.5e-14 84.0 158 38.6
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 4.2e-14 83.2 122 41.8
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 7.2e-14 82.4 135 38.5
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 7.2e-14 82.4 135 38.5
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 7.2e-14 82.4 275 31.6
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 9.4e-14 82.0 208 34.1
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 2.1e-13 80.9 176 35.8
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 2.7e-13 80.5 129 40.3
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 2.7e-13 80.5 135 37.0
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 2.7e-13 80.5 135 37.0
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 4.7e-13 79.7 153 38.6
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 4.7e-13 79.7 272 28.3
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 6.1e-13 79.3 159 34.6
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 1.8e-12 77.8 263 30.0
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 2.3e-12 77.4 135 38.5
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 2.3e-12 77.4 305 32.5
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 3.0e-12 77.0 212 33.5
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 4.0e-12 76.6 260 32.3
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 5.2e-12 76.3 136 41.9
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 6.8e-12 75.9 261 31.0
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 6.8e-12 75.9 137 35.0
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 6.8e-12 75.9 268 30.2
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 8.8e-12 75.5 282 29.1
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 3.4e-11 73.6 299 31.4
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 7.5e-11 72.4 274 29.9
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 9.8e-11 72.0 123 39.8
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 9.8e-11 72.0 260 28.1
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.3e-10 71.6 278 29.9
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 1.3e-10 71.6 276 29.0
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 1.7e-10 71.2 211 32.7
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 8.3e-10 68.9 152 38.8
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.1e-09 68.6 282 27.7
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.1e-09 68.6 167 34.1
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.1e-09 68.6 282 29.1
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 1.4e-09 68.2 134 35.1
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 1.8e-09 67.8 261 33.0
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 7.0e-09 65.9 99 39.4
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 9.1e-09 65.5 160 35.6
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.6e-08 64.7 394 25.1
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 2.7e-08 63.9 128 34.4
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.7e-07 61.2 66 47.0
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.7e-07 61.2 263 31.2
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.0e-07 59.7 111 36.9
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.5e-06 58.2 245 26.5
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 1.9e-06 57.8 101 38.6
SEGI_17188 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 7.2e-06 55.8 140 33.6


User provided reference genes

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