Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 3.0e-114 415.2 217 100.0
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.2e-54 217.2 205 59.0
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.3e-52 208.8 153 69.3
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 9.6e-52 207.6 161 68.3
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 9.6e-52 207.6 162 67.9
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.6e-52 207.6 153 68.6
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 1.6e-51 206.8 136 75.7
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.6e-51 206.8 153 68.6
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 8.1e-51 204.5 141 69.5
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 8.1e-51 204.5 163 64.4
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.4e-50 203.8 137 73.0
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 1.8e-50 203.4 163 65.6
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 1.8e-50 203.4 171 64.3
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 3.1e-50 202.6 150 68.7
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 4.0e-50 202.2 169 61.5
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 4.0e-50 202.2 169 61.5
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 4.0e-50 202.2 139 71.2
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.3e-50 201.8 163 63.8
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 9.0e-50 201.1 175 63.4
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 9.0e-50 201.1 131 75.6
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 9.0e-50 201.1 133 75.2
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 9.0e-50 201.1 169 63.3
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 1.2e-49 200.7 209 53.1
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 2.0e-49 199.9 150 66.7
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 3.4e-49 199.1 155 67.1
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.4e-49 199.1 164 63.4
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 4.5e-49 198.7 201 56.2
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 4.5e-49 198.7 137 71.5
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 7.6e-49 198.0 139 70.5
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 1.3e-48 197.2 162 63.0
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 3.8e-48 195.7 163 62.0
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 4.9e-48 195.3 161 64.0
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.9e-48 195.3 161 64.0
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 4.9e-48 195.3 162 63.6
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 6.4e-48 194.9 201 54.2
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 6.4e-48 194.9 156 65.4
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 8.4e-48 194.5 149 67.8
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 8.4e-48 194.5 209 51.2
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.4e-47 193.7 220 50.9
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 2.4e-47 193.0 148 67.6
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 2.4e-47 193.0 142 70.4
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.4e-47 193.0 161 63.4
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.2e-47 192.6 128 74.2
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 5.4e-47 191.8 149 67.1
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 5.4e-47 191.8 128 74.2
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 5.4e-47 191.8 128 71.9
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 5.4e-47 191.8 128 71.9
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 5.4e-47 191.8 171 60.2
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 9.3e-47 191.0 149 67.1
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 9.3e-47 191.0 162 62.3
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 9.3e-47 191.0 145 67.6
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.2e-46 190.7 211 52.1
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.6e-46 190.3 159 64.8
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 2.1e-46 189.9 163 61.3
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.1e-46 189.9 124 75.0
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 2.7e-46 189.5 162 63.0
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 4.6e-46 188.7 163 59.5
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 6.0e-46 188.3 170 60.0
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 7.9e-46 188.0 172 57.6
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.8e-45 186.8 151 64.2
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 3.0e-45 186.0 128 73.4
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 3.0e-45 186.0 193 56.0
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 6.7e-45 184.9 125 71.2
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 6.7e-45 184.9 170 58.8
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 6.7e-45 184.9 183 59.6
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.9e-44 183.3 143 64.3
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.3e-44 182.2 148 64.2
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.4e-42 176.4 162 58.6
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 4.0e-42 175.6 132 63.6
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.5e-41 173.7 118 69.5
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.3e-40 170.6 115 73.0
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.7e-40 170.2 158 58.9
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 3.2e-39 166.0 117 66.7
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 7.9e-38 161.4 124 66.1
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.0e-37 161.0 130 60.8
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 1.3e-37 160.6 128 64.1
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 3.0e-37 159.5 119 64.7
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 6.2e-35 151.8 155 51.0
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 1.8e-34 150.2 140 55.0
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 2.4e-34 149.8 124 58.9
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 4.0e-34 149.1 98 70.4
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 5.8e-33 145.2 94 74.5
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 2.9e-32 142.9 92 75.0
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 2.5e-31 139.8 176 49.4
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.2e-31 139.4 111 63.1
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 5.5e-31 138.7 124 58.9
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 1.2e-30 137.5 185 42.2
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.9e-28 130.2 101 69.3
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.6e-28 127.9 83 77.1
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 6.3e-27 125.2 71 81.7
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.2e-27 124.8 161 49.1
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 1.1e-26 124.4 123 57.7
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 1.8e-26 123.6 102 61.8
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.8e-26 123.6 94 68.1
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.4e-25 119.4 153 47.7
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.0e-24 117.9 83 68.7
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 3.2e-23 112.8 81 70.4
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 4.1e-18 95.9 92 56.5
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.6e-17 93.2 164 39.0
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 5.0e-16 89.0 49 83.7
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 8.5e-16 88.2 64 65.6
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 1.1e-15 87.8 124 42.7
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 7.2e-15 85.1 70 62.9
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 3.3e-12 76.3 126 38.9
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 4.4e-12 75.9 128 42.2
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 5.3e-10 68.9 130 33.1
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 5.3e-10 68.9 90 46.7
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 6.9e-10 68.6 116 33.6
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 9.1e-10 68.2 118 30.5
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 3.4e-09 66.2 143 34.3
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 4.5e-09 65.9 111 32.4
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 5.9e-09 65.5 115 33.0
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 7.7e-09 65.1 118 33.9
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 1.0e-08 64.7 113 32.7
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 1.3e-08 64.3 118 34.7
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 6.5e-08 62.0 124 32.3
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 6.5e-08 62.0 144 31.9
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 8.5e-08 61.6 163 30.1
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 8.5e-08 61.6 131 32.8
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.4e-07 60.8 144 30.6
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 3.2e-07 59.7 163 28.2
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 4.2e-07 59.3 192 28.1
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 5.5e-07 58.9 152 28.9
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 7.2e-07 58.5 138 29.7
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 2.7e-06 56.6 158 27.8
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 3.6e-06 56.2 127 31.5
Nn1g02040 Nelumbo nucifera HOM05D009116 ORTHO05D011299 3.6e-06 56.2 85 35.3
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 4.7e-06 55.8 185 27.0


User provided reference genes

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