Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.3e-97 359.8 189 100.0
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.7e-60 236.5 175 72.0
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 6.4e-60 234.6 178 69.1
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 5.4e-59 231.5 175 68.0
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 7.0e-59 231.1 173 73.4
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 1.2e-58 230.3 178 70.2
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 7.8e-58 227.6 174 70.1
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 1.0e-57 227.3 167 70.7
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 1.0e-57 227.3 173 69.9
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 3.9e-57 225.3 174 69.0
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 3.9e-57 225.3 169 68.6
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 6.6e-57 224.6 173 67.1
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 8.6e-57 224.2 174 70.7
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 1.1e-56 223.8 177 68.9
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.5e-56 223.4 174 68.4
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.9e-56 223.0 174 68.4
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 2.5e-56 222.6 175 68.0
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 2.5e-56 222.6 157 72.6
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 3.3e-56 222.2 178 67.4
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 3.3e-56 222.2 177 67.8
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 3.3e-56 222.2 173 70.5
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 7.3e-56 221.1 175 68.6
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 9.5e-56 220.7 177 67.8
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.2e-55 220.3 175 65.1
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.2e-55 220.3 171 70.2
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 1.6e-55 219.9 177 66.1
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 2.1e-55 219.5 167 69.5
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 2.8e-55 219.2 173 67.6
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 6.2e-55 218.0 177 66.1
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 6.2e-55 218.0 167 68.9
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 1.1e-54 217.2 178 66.3
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.1e-54 217.2 172 66.3
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.1e-54 217.2 178 64.0
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.8e-54 216.5 170 67.1
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.8e-54 216.5 173 69.4
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 2.3e-54 216.1 173 67.6
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 3.1e-54 215.7 177 65.5
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 6.8e-54 214.5 173 65.9
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 8.9e-54 214.2 178 65.2
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 1.5e-53 213.4 173 65.9
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 1.5e-53 213.4 166 68.7
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 2.6e-53 212.6 167 66.5
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 3.4e-53 212.2 167 66.5
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 3.4e-53 212.2 175 64.0
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 7.5e-53 211.1 175 64.0
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 9.9e-53 210.7 173 64.2
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 1.7e-52 209.9 176 63.6
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 1.7e-52 209.9 175 62.9
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 3.7e-52 208.8 177 67.2
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 6.4e-52 208.0 175 64.0
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 8.3e-52 207.6 174 63.2
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 8.3e-52 207.6 170 65.3
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 1.1e-51 207.2 174 60.9
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.4e-51 206.8 174 63.2
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 1.9e-51 206.5 177 64.4
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 4.1e-51 205.3 167 65.3
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 4.1e-51 205.3 170 64.1
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 7.1e-51 204.5 175 61.7
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 9.2e-51 204.1 175 64.0
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.2e-50 203.8 177 63.3
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.6e-50 203.4 177 63.8
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 2.1e-50 203.0 167 64.7
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.7e-50 202.6 174 64.4
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 3.5e-50 202.2 175 64.0
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 3.5e-50 202.2 172 63.4
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 7.8e-50 201.1 177 62.1
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 7.8e-50 201.1 150 71.3
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.0e-49 200.7 175 62.3
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 1.0e-49 200.7 174 61.5
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 1.0e-49 200.7 174 61.5
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 1.0e-49 200.7 174 61.5
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 1.3e-49 200.3 174 61.5
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 1.3e-49 200.3 174 61.5
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.7e-49 199.9 174 61.5
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.7e-49 199.9 174 62.6
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 8.6e-49 197.6 174 61.5
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 8.6e-49 197.6 175 61.7
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 8.6e-49 197.6 175 61.7
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 3.3e-48 195.7 174 60.9
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 9.5e-48 194.1 173 64.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.2e-47 193.7 227 51.1
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 1.6e-47 193.4 175 59.4
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 4.0e-46 188.7 176 58.5
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 6.8e-46 188.0 170 60.0
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 4.9e-44 181.8 163 60.7
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 2.4e-43 179.5 177 58.8
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 4.6e-42 175.3 137 67.9
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 4.6e-42 175.3 167 55.7
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 1.0e-41 174.1 171 54.4
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 3.9e-41 172.2 178 54.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.1e-40 170.6 153 58.8
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 3.3e-40 169.1 124 68.5
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.6e-39 166.8 136 68.4
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 3.8e-36 155.6 297 39.7
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.9e-35 153.3 137 60.6
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 3.5e-34 149.1 96 77.1
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.7e-28 130.2 105 69.5
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.7e-28 130.2 105 69.5
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 1.4e-27 127.1 154 45.5
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 1.0e-25 120.9 105 62.9
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 3.0e-17 92.8 146 39.0
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 6.2e-15 85.1 57 75.4
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.4e-11 73.9 130 38.5
TAR624G1004 Trochodendron aralioides HOM05D000386 ORTHO05D414906 4.1e-06 55.8 72 50.0


User provided reference genes

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