Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G118 Amborella trichopoda HOM05D003064 ORTHO05D001733 3.4e-46 188.3 123 100.0
MBI13_g29645_MAGBIO Magnolia biondii HOM05D003064 ORTHO05D001733 5.1e-10 68.2 102 38.2
TPR.G9574 Trifolium pratense HOM05D003064 ORTHO05D001733 2.2e-08 62.8 120 33.3
HPP92_004380 Vanilla planifolia HOM05D003064 ORTHO05D001733 2.2e-08 62.8 121 29.8
Prupe.6G010800 Prunus persica HOM05D003064 ORTHO05D001733 2.8e-08 62.4 118 32.2
CiPaw.13G171900 Carya illinoinensis HOM05D003064 ORTHO05D001733 3.7e-08 62.0 44 59.1
ATR0598G068 Amborella trichopoda HOM05D003064 ORTHO05D001733 6.3e-08 61.2 129 34.9
COL.COLO4_10451 Corchorus olitorius HOM05D003064 ORTHO05D001733 6.3e-08 61.2 39 64.1
PGR102G1745 Punica granatum HOM05D003064 ORTHO05D001733 8.2e-08 60.8 109 37.6
PSO339G6128 Papaver somniferum HOM05D003064 ORTHO05D001733 1.1e-07 60.5 119 31.9
PSO384G3054 Papaver somniferum HOM05D003064 ORTHO05D001733 1.1e-07 60.5 119 31.9
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.4e-07 60.1 37 70.3
THA.LOC104807528 Tarenaya hassleriana HOM05D003064 ORTHO05D001733 1.4e-07 60.1 37 64.9
Thecc.09G214600 Theobroma cacao HOM05D003064 ORTHO05D001733 1.4e-07 60.1 106 34.0
Aqoxy2G00087 Aquilegia oxysepala HOM05D003064 ORTHO05D001733 1.8e-07 59.7 123 31.7
Haze_22989 Corylus avellana HOM05D003064 ORTHO05D001733 1.8e-07 59.7 33 75.8
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 2.4e-07 59.3 118 33.1
BcaB08g36562 Brassica carinata HOM05D003064 ORTHO05D001733 4.1e-07 58.5 33 69.7
Ca_18172_v3 Cicer arietinum L. HOM05D003064 ORTHO05D001733 4.1e-07 58.5 104 35.6
FvH4_3g44720 Fragaria vesca HOM05D003064 ORTHO05D001733 4.1e-07 58.5 52 55.8
FAN21G0865 Fragaria x ananassa HOM05D000001 ORTHO05D010412 4.1e-07 58.5 52 55.8
Manes.15G104400 Manihot esculenta HOM05D003064 ORTHO05D001733 5.3e-07 58.2 102 34.3
MD03G1010900 Malus domestica HOM05D003064 ORTHO05D001733 7.0e-07 57.8 119 32.8
Phvul.002G181000 Phaseolus vulgaris HOM05D003064 ORTHO05D001733 7.0e-07 57.8 37 62.2
TAR633G1282 Trochodendron aralioides HOM05D003064 ORTHO05D001733 7.0e-07 57.8 118 33.1
arahy.Tifrunner.gnm1.ann1.0YUQ4V Arachis hypogaea HOM05D003064 ORTHO05D001733 9.1e-07 57.4 116 31.9
arahy.Tifrunner.gnm1.ann1.MW6VFJ Arachis hypogaea HOM05D003064 ORTHO05D001733 9.1e-07 57.4 116 31.9
Psat7g081160 Pisum sativum HOM05D003064 ORTHO05D001733 9.1e-07 57.4 104 34.6
Ah.06g193080 Amaranthus hybridus HOM05D003064 ORTHO05D001733 1.2e-06 57.0 104 35.6
BcaB01g04824 Brassica carinata HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 69.7
BcaC04g19393 Brassica carinata HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 66.7
A03p09690 Brassica napus HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 69.7
A10p19870 Brassica napus HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 66.7
BolC3t13597H Brassica oleracea HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 69.7
BolC9t58489H Brassica oleracea HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 66.7
BraA03t10285Z Brassica rapa HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 69.7
BraA10t44062Z Brassica rapa HOM05D003064 ORTHO05D001733 1.2e-06 57.0 33 66.7
Glyma.05G141600 Glycine max HOM05D003064 ORTHO05D001733 1.2e-06 57.0 118 29.7
Potri.001G009300 Populus trichocarpa HOM05D003064 ORTHO05D001733 1.2e-06 57.0 39 61.5
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 1.2e-06 57.0 107 33.6
TAR633G2572 Trochodendron aralioides HOM05D003064 ORTHO05D001733 1.2e-06 57.0 106 32.1
CSS0011912 Camellia sinensis var. sinensis HOM05D003064 ORTHO05D001733 1.5e-06 56.6 120 31.7
AUR62000034 Chenopodium quinoa HOM05D003064 ORTHO05D001733 1.5e-06 56.6 100 33.0
AUR62019204 Chenopodium quinoa HOM05D003064 ORTHO05D001733 1.5e-06 56.6 100 32.0
Phvul.008G217700 Phaseolus vulgaris HOM05D003064 ORTHO05D001733 1.5e-06 56.6 121 32.2
VMungo0251G1179 Vigna mungo HOM05D003064 ORTHO05D001733 1.5e-06 56.6 37 59.5
BcaC04g19388 Brassica carinata HOM05D003064 ORTHO05D001733 2.0e-06 56.2 33 66.7
C02p35760 Brassica napus HOM05D003064 ORTHO05D001733 2.0e-06 56.2 33 66.7
C09p56240 Brassica napus HOM05D003064 ORTHO05D001733 2.0e-06 56.2 33 66.7
BolC9t58493H Brassica oleracea HOM05D003064 ORTHO05D001733 2.0e-06 56.2 33 66.7
FAN25G0198 Fragaria x ananassa HOM05D000001 ORTHO05D010412 2.0e-06 56.2 52 55.8
TAR623G1618 Trochodendron aralioides HOM05D003064 ORTHO05D001733 2.0e-06 56.2 117 29.9
Gohir.A08G012000 Gossypium hirsutum HOM05D003064 ORTHO05D001733 2.6e-06 55.8 37 64.9
Gohir.D08G022500 Gossypium hirsutum HOM05D003064 ORTHO05D001733 2.6e-06 55.8 37 64.9
Gorai.004G017800 Gossypium raimondii HOM05D003064 ORTHO05D001733 2.6e-06 55.8 37 64.9
MD11G1012700 Malus domestica HOM05D003064 ORTHO05D001733 2.6e-06 55.8 118 31.4
Potri.003G216000 Populus trichocarpa HOM05D003064 ORTHO05D001733 2.6e-06 55.8 105 33.3
arahy.Tifrunner.gnm1.ann1.GF7MHW Arachis hypogaea HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 66.7
arahy.Tifrunner.gnm1.ann1.ZL4T1U Arachis hypogaea HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 66.7
CiPaw.13G172000 Carya illinoinensis HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 69.7
Duzib150G0559 Durio zibethinus HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 69.7
Eucgr.B03629 Eucalyptus grandis HOM05D003064 ORTHO05D001733 3.4e-06 55.5 109 33.0
Glyma.02G258600 Glycine max HOM05D003064 ORTHO05D001733 3.4e-06 55.5 121 31.4
Lalb_Chr10g0105471 Lupinus albus HOM05D003064 ORTHO05D001733 3.4e-06 55.5 114 31.6
Potri.003G216100 Populus trichocarpa HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 69.7
QL01p010327 Quercus lobata HOM05D003064 ORTHO05D001733 3.4e-06 55.5 38 63.2
RcHm_v2.0_Chr5g0081421 Rosa chinensis HOM05D003064 ORTHO05D001733 3.4e-06 55.5 57 50.9
Sp6g24510 Schrenkiella parvula HOM05D003064 ORTHO05D001733 3.4e-06 55.5 33 66.7
VMungo0647G0318 Vigna mungo HOM05D003064 ORTHO05D001733 3.4e-06 55.5 121 31.4
EL10Ac4g10343 Beta vulgaris HOM05D003064 ORTHO05D001733 4.5e-06 55.1 104 33.7
Ciclev10017191m.g Citrus clementina HOM05D003064 ORTHO05D001733 4.5e-06 55.1 37 56.8
Gohir.A13G213900 Gossypium hirsutum HOM05D003064 ORTHO05D001733 4.5e-06 55.1 33 69.7
Gohir.D13G217700 Gossypium hirsutum HOM05D003064 ORTHO05D001733 4.5e-06 55.1 33 69.7
Gorai.013G248300 Gossypium raimondii HOM05D003064 ORTHO05D001733 4.5e-06 55.1 33 69.7
Atru.chr3.2225 Acer truncatum HOM05D003064 ORTHO05D001733 5.9e-06 54.7 107 33.6
AL6G31410 Arabidopsis lyrata HOM05D003064 ORTHO05D001733 5.9e-06 54.7 33 66.7
AT5G19875 Arabidopsis thaliana HOM05D003064 ORTHO05D001733 5.9e-06 54.7 33 66.7
BcaC03g15831 Brassica carinata HOM05D003064 ORTHO05D001733 5.9e-06 54.7 33 63.6
Carub.0006s1824 Capsella rubella HOM05D003064 ORTHO05D001733 5.9e-06 54.7 33 66.7
Haze_22990 Corylus avellana HOM05D003064 ORTHO05D001733 5.9e-06 54.7 109 31.2
Glyma.14G053000 Glycine max HOM05D003064 ORTHO05D001733 5.9e-06 54.7 121 31.4
QL01p010317 Quercus lobata HOM05D003064 ORTHO05D001733 7.7e-06 54.3 105 32.4


User provided reference genes

Program Settings