Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G102 Amborella trichopoda HOM05D015801 ORTHO05D011070 1.2e-274 949.1 465 100.0
ATR0598G036 Amborella trichopoda HOM05D015801 ORTHO05D011070 6.5e-215 750.7 412 88.6
ATR0681G009 Amborella trichopoda HOM05D015801 ORTHO05D011070 5.8e-131 471.9 399 56.6
ATR0594G199 Amborella trichopoda HOM05D015801 ORTHO05D011070 5.1e-127 458.8 399 57.1
ATR1127G193 Amborella trichopoda HOM05D015801 ORTHO05D011070 6.3e-101 372.1 395 48.1
ATR1127G159 Amborella trichopoda HOM05D015801 ORTHO05D011070 7.0e-68 262.3 402 40.5
ATR0594G072 Amborella trichopoda HOM05D015801 ORTHO05D011070 3.5e-51 206.8 178 56.7
ATR0681G100 Amborella trichopoda HOM05D015022 ORTHO05D011070 2.6e-46 190.7 365 33.7
ATR0681G080 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.6e-40 171.4 408 32.4
ATR0824G055 Amborella trichopoda HOM05D015022 ORTHO05D011070 2.4e-39 167.5 360 33.9
ATR0824G139 Amborella trichopoda HOM05D015022 ORTHO05D011070 2.4e-39 167.5 362 33.4
ATR0772G161 Amborella trichopoda HOM05D015022 ORTHO05D011070 4.9e-29 133.3 360 29.7
ATR0681G217 Amborella trichopoda HOM05D015801 ORTHO05D011070 4.8e-24 116.7 233 34.8
ATR0796G283 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.1e-20 105.5 318 28.9
ATR0866G001 Amborella trichopoda HOM05D015022 ORTHO05D011070 3.9e-18 97.1 397 24.9
ATR1136G141 Amborella trichopoda HOM05D011842 ORTHO05D011366 2.5e-17 94.4 294 28.6
ATR1136G003 Amborella trichopoda HOM05D011842 ORTHO05D011366 4.0e-15 87.0 318 26.7
ATR0736G026 Amborella trichopoda HOM05D012411 ORTHO05D011070 3.4e-14 84.0 290 26.2
ATR0794G151 Amborella trichopoda HOM05D013040 ORTHO05D011366 1.7e-13 81.6 280 27.9
ATR1096G135 Amborella trichopoda HOM05D012411 ORTHO05D011070 2.2e-13 81.3 319 25.1
ATR0605G101 Amborella trichopoda HOM05D011842 ORTHO05D011070 2.5e-12 77.8 145 29.7
ATR0736G153 Amborella trichopoda HOM05D012411 ORTHO05D011070 2.5e-12 77.8 244 27.5
ATR0763G270 Amborella trichopoda HOM05D011842 ORTHO05D011366 1.6e-11 75.1 319 25.4
ATR0736G009 Amborella trichopoda HOM05D013040 ORTHO05D011366 4.6e-11 73.6 361 25.8
A03p39720 Brassica napus HOM05D000007 ORTHO05D011249 4.6e-11 73.6 282 25.5
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 6.0e-11 73.2 291 27.5
BraA03t13122Z Brassica rapa HOM05D000007 ORTHO05D011249 1.0e-10 72.4 282 25.2
PSO675G0641 Papaver somniferum HOM05D000007 ORTHO05D000676 1.0e-10 72.4 286 26.9
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.3e-10 72.0 341 27.9
ATR0605G307 Amborella trichopoda HOM05D011842 ORTHO05D011366 1.8e-10 71.6 292 27.1
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.8e-10 71.6 306 25.8
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-10 71.6 289 29.8
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 3.0e-10 70.9 255 26.3
C05p50290 Brassica napus HOM05D000007 ORTHO05D011249 8.7e-10 69.3 286 24.5
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 8.7e-10 69.3 297 27.3
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-09 68.6 270 25.9
AL1G45300 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.9e-09 68.2 259 25.1
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 1.9e-09 68.2 300 25.3
Aa31LG8G3350 Aethionema arabicum HOM05D000007 ORTHO05D011249 3.3e-09 67.4 301 23.6
Carub.0001s2930 Capsella rubella HOM05D000171 ORTHO05D000101 3.3e-09 67.4 273 24.2
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-09 67.0 288 28.8
BcaB04g18889 Brassica carinata HOM05D000007 ORTHO05D011249 7.4e-09 66.2 273 25.3
Thhalv10022274m.g Eutrema salsugineum HOM05D000007 ORTHO05D011249 7.4e-09 66.2 284 26.1
SalBow1G7289 Salvia bowleyana HOM05D000007 ORTHO05D000017 9.6e-09 65.9 282 27.0
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.3e-08 65.5 306 24.5
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-08 65.1 290 25.2
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 1.6e-08 65.1 287 23.7
Lalb_Chr07g0187081 Lupinus albus HOM05D002809 ORTHO05D004563 2.1e-08 64.7 283 26.9
Carub.0003s1596 Capsella rubella HOM05D000007 ORTHO05D000017 3.7e-08 63.9 303 24.1
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 3.7e-08 63.9 295 24.1
Os10g0396100 Oryza sativa ssp. japonica HOM05D052456 ORTHO05D000017 3.7e-08 63.9 313 24.3
BolC5t33779H Brassica oleracea HOM05D000007 ORTHO05D011249 4.8e-08 63.5 286 24.1
A05p33290 Brassica napus HOM05D000007 ORTHO05D011249 8.2e-08 62.8 257 26.8
Migut.F01618 Erythranthe guttata HOM05D000007 ORTHO05D000017 8.2e-08 62.8 285 21.8
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 8.2e-08 62.8 285 25.6
AL1G53500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-07 62.4 261 23.8
Duzib205G1409 Durio zibethinus HOM05D000171 ORTHO05D000101 1.1e-07 62.4 266 23.3
Actinidia35052 Actinidia chinensis HOM05D000007 ORTHO05D000676 1.4e-07 62.0 273 23.8
Glyma.17G008200 Glycine max HOM05D000007 ORTHO05D000017 1.4e-07 62.0 296 25.0
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.4e-07 62.0 293 25.3
Rhsim04G0042200 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-07 61.6 339 21.2
TPR.G40220 Trifolium pratense HOM05D000007 ORTHO05D000017 1.8e-07 61.6 172 27.3
COL.COLO4_29077 Corchorus olitorius HOM05D000007 ORTHO05D000017 2.4e-07 61.2 405 21.7
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 2.4e-07 61.2 247 25.1
Aqoxy4G00367 Aquilegia oxysepala HOM05D000007 ORTHO05D018413 3.1e-07 60.8 171 27.5
Duzib147G0121 Durio zibethinus HOM05D000007 ORTHO05D000039 3.1e-07 60.8 288 26.4
HanXRQChr03g0066051 Helianthus annuus HOM05D000007 ORTHO05D000017 3.1e-07 60.8 317 22.7
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.1e-07 60.5 194 28.9
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.1e-07 60.5 321 26.8
TAR381G1454 Trochodendron aralioides HOM05D000007 ORTHO05D000521 5.3e-07 60.1 284 25.0
Medtr7g060940 Medicago truncatula HOM05D000007 ORTHO05D000017 6.9e-07 59.7 315 22.9
Potri.006G170300 Populus trichocarpa HOM05D000007 ORTHO05D000039 9.0e-07 59.3 328 24.7
ATR1134G109 Amborella trichopoda HOM05D041856 ORTHO05D011070 1.2e-06 58.9 157 31.2
Dinv36838 Davidia involucrata HOM05D001394 ORTHO05D001237 1.2e-06 58.9 161 30.4
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.5e-06 58.5 262 24.4
ATR0561G071 Amborella trichopoda HOM05D005977 ORTHO05D004563 2.0e-06 58.2 281 24.9
Glyma.07G265800 Glycine max HOM05D000007 ORTHO05D000017 2.0e-06 58.2 293 25.3
HanXRQChr15g0467301 Helianthus annuus HOM05D000007 ORTHO05D000039 2.0e-06 58.2 290 21.7
Rhsim01G0013300 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.0e-06 58.2 239 26.8
Atru.chr3.3109 Acer truncatum HOM05D000007 ORTHO05D000521 2.6e-06 57.8 281 26.7
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-06 57.8 265 25.3
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.6e-06 57.8 218 27.5
Haze_06338 Corylus avellana HOM05D000007 ORTHO05D000017 2.6e-06 57.8 290 23.4
Migut.F01612 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.6e-06 57.8 280 20.7
Rhsim01G0071800 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.4e-06 57.4 352 25.3
AL6G22480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-06 57.0 314 21.3
COL.COLO4_09396 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.5e-06 57.0 273 22.0
Medtr3g007360 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 57.0 347 21.6
Medtr5g057710 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 57.0 293 21.5
Rhsim01G0013400 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.5e-06 57.0 260 25.4
COL.COLO4_18783 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.9e-06 56.6 249 24.1
HanXRQChr03g0074871 Helianthus annuus HOM05D000007 ORTHO05D000521 5.9e-06 56.6 282 23.4
Medtr3g007410 Medicago truncatula HOM05D000007 ORTHO05D000017 5.9e-06 56.6 347 21.9
Psat5g230320 Pisum sativum HOM05D000007 ORTHO05D000017 5.9e-06 56.6 317 25.2
AL1G53540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.6e-06 56.2 266 24.1
AL5G33030 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.6e-06 56.2 283 23.0
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 7.6e-06 56.2 252 24.2
ECA238G0420 Erigeron canadensis HOM05D000007 ORTHO05D000017 7.6e-06 56.2 233 23.2
FAN27G3437 Fragaria x ananassa HOM05D000007 ORTHO05D000521 7.6e-06 56.2 329 24.0
Nitab4.5_0001418g0080 Nicotiana tabacum HOM05D000007 ORTHO05D005385 7.6e-06 56.2 272 22.1
PGSC0003DMG400009207 Solanum tuberosum HOM05D000007 ORTHO05D000521 7.6e-06 56.2 315 24.1
AL6G22600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-05 55.8 303 20.5
AUR62003167 Chenopodium quinoa HOM05D002420 ORTHO05D002422 1.0e-05 55.8 278 23.4
Dinv17447 Davidia involucrata HOM05D000007 ORTHO05D000676 1.0e-05 55.8 242 24.8
PSO386G0261 Papaver somniferum HOM05D000007 ORTHO05D000676 1.0e-05 55.8 173 26.6


User provided reference genes

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