Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0598G088 Amborella trichopoda HOM05D000088 ORTHO05D038357 1.3e-88 329.7 165 100.0
Manes.16G084200 Manihot esculenta HOM05D000088 ORTHO05D009852 1.3e-21 107.1 176 37.5
Potri.006G222600 Populus trichocarpa HOM05D000239 ORTHO05D009852 1.8e-18 96.7 171 35.7
FvH4_2g31250 Fragaria vesca HOM05D000088 ORTHO05D009852 2.0e-17 93.2 114 45.6
FAN24G3584 Fragaria x ananassa HOM05D000239 ORTHO05D009852 3.4e-17 92.4 114 45.6
ECA240G3681 Erigeron canadensis HOM05D000088 ORTHO05D009852 1.9e-15 86.7 125 37.6
CANSAT25G0203 Cannabis sativa HOM05D000239 ORTHO05D009852 9.3e-15 84.3 125 39.2
Dinv10388 Davidia involucrata HOM05D000088 ORTHO05D009852 3.5e-14 82.4 168 33.3
Eucgr.C00711 Eucalyptus grandis HOM05D000239 ORTHO05D009852 2.3e-13 79.7 156 31.4
Lsat_1_v5_gn_7_58821 Lactuca sativa HOM05D000239 ORTHO05D009852 2.3e-13 79.7 124 35.5
RcHm_v2.0_Chr6g0311551 Rosa chinensis HOM05D000239 ORTHO05D009852 3.0e-13 79.3 106 39.6
FAN15G3484 Fragaria x ananassa HOM05D000560 ORTHO05D009852 6.7e-13 78.2 133 36.8
Prupe.1G406200 Prunus persica HOM05D000088 ORTHO05D009852 6.7e-13 78.2 129 37.2
DCAR_000818 Daucus carota HOM05D000239 ORTHO05D009852 8.7e-13 77.8 164 34.1
Migut.A00090 Erythranthe guttata HOM05D000088 ORTHO05D009852 8.7e-13 77.8 168 32.7
HanXRQChr04g0097831 Helianthus annuus HOM05D000239 ORTHO05D009852 1.5e-12 77.0 125 33.6
Cpa.g.sc126.39 Carica papaya HOM05D000239 ORTHO05D009852 1.9e-12 76.6 116 37.9
Glyma.06G055300 Glycine max HOM05D000088 ORTHO05D009852 2.5e-12 76.3 112 34.8
Cfa018008 Carpinus fangiana HOM05D000239 ORTHO05D009852 7.4e-12 74.7 106 33.0
Peaxi162Scf00101g00138 Petunia axillaris HOM05D000088 ORTHO05D009852 7.4e-12 74.7 110 36.4
arahy.Tifrunner.gnm1.ann1.85NTLH Arachis hypogaea HOM05D000088 ORTHO05D009852 9.6e-12 74.3 152 30.3
VMungo1309G0372 Vigna mungo HOM05D000088 ORTHO05D009852 1.3e-11 73.9 102 34.3
Eucgr.C00708 Eucalyptus grandis HOM05D000088 ORTHO05D009852 2.8e-11 72.8 191 29.3
FAN20G1341 Fragaria x ananassa HOM05D000088 ORTHO05D009852 2.8e-11 72.8 133 35.3
Oeu022780.1 Olea europaea HOM05D000088 ORTHO05D009852 3.7e-11 72.4 170 32.4
TWI34G1649 Tripterygium wilfordii HOM05D000088 ORTHO05D009852 3.7e-11 72.4 140 35.7
Actinidia03309 Actinidia chinensis HOM05D000088 ORTHO05D009852 1.4e-10 70.5 112 33.9
Haze_18122 Corylus avellana HOM05D000239 ORTHO05D009852 2.4e-10 69.7 106 32.1
Ca_15838_v3 Cicer arietinum L. HOM05D000088 ORTHO05D009852 4.0e-10 68.9 118 36.4
Duzib168G1162 Durio zibethinus HOM05D000088 ORTHO05D009852 4.0e-10 68.9 159 30.2
Gohir.A05G039400 Gossypium hirsutum HOM05D000088 ORTHO05D009852 5.3e-10 68.6 106 35.8
Gorai.009G041400 Gossypium raimondii HOM05D000088 ORTHO05D009852 5.3e-10 68.6 106 35.8
Lj5g0026623 Lotus japonicus HOM05D000088 ORTHO05D009852 5.3e-10 68.6 109 32.1
Phvul.001G039300 Phaseolus vulgaris HOM05D000088 ORTHO05D009852 5.3e-10 68.6 116 31.9
COL.COLO4_21121 Corchorus olitorius HOM05D000239 ORTHO05D009852 6.9e-10 68.2 112 33.9
PGR031G0183 Punica granatum HOM05D000239 ORTHO05D009852 6.9e-10 68.2 121 33.1
Gohir.D05G040900 Gossypium hirsutum HOM05D000088 ORTHO05D009852 2.0e-09 66.6 105 35.2
Atru.chr7.1865 Acer truncatum HOM05D000239 ORTHO05D009852 2.6e-09 66.2 107 34.6
Glyma.17G225400 Glycine max HOM05D000088 ORTHO05D009852 2.6e-09 66.2 157 32.5
PGSC0003DMG400021741 Solanum tuberosum HOM05D000088 ORTHO05D009852 3.4e-09 65.9 109 33.0
Thecc.09G061400 Theobroma cacao HOM05D000088 ORTHO05D009852 3.4e-09 65.9 142 31.7
Phvul.009G081200 Phaseolus vulgaris HOM05D000088 ORTHO05D009852 5.8e-09 65.1 125 30.4
TPR.G39753 Trifolium pratense HOM05D000239 ORTHO05D009852 3.8e-08 62.4 121 31.4
Medtr3g104900 Medicago truncatula HOM05D000088 ORTHO05D009852 4.9e-08 62.0 182 25.3
Psat0s89g0120 Pisum sativum HOM05D000088 ORTHO05D009852 4.9e-08 62.0 100 35.0
MBI19_g35475_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D009852 8.4e-08 61.2 79 39.2
Glyma.14G099300 Glycine max HOM05D000088 ORTHO05D009852 1.1e-07 60.8 92 38.0
MD08G1069800 Malus domestica HOM05D000088 ORTHO05D009852 1.4e-07 60.5 93 38.7
Solyc08g062140.1 Solanum lycopersicum HOM05D000088 ORTHO05D009852 2.5e-07 59.7 171 27.5
PGR031G2064 Punica granatum HOM05D000239 ORTHO05D009852 4.2e-07 58.9 106 32.1
CAN.G1588.5 Capsicum annuum HOM05D000239 ORTHO05D009852 1.2e-06 57.4 189 28.0
Zm00001eb100290 Zea mays HOM05D000088 ORTHO05D038357 2.1e-06 56.6 94 35.1
MD15G1052200 Malus domestica HOM05D000088 ORTHO05D009852 2.7e-06 56.2 87 34.5
ClCG05G015650 Citrullus lanatus HOM05D000239 ORTHO05D009852 4.6e-06 55.5 163 28.2


User provided reference genes

Program Settings